RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 GATA2P23769 480 aaPredicted RBP8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 LCN15Q6UWW0 184 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 LRTM2Q8N967 370 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 OR10P1Q8NGE3 313 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 UPK3BQ9BT76 320 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PSENENQ9NZ42 101 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 TRAV8-2A0A0B4J237 113 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 A0A0J9YY99 117 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 GAGE12BA1L429 117 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 GAGE7O76087 117 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 HOXB5P09067 269 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 GAGE12FP0CL80 117 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 GAGE12GP0CL81 117 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 GAGE12IP0CL82 117 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PLP1P60201 277 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 DLK1P80370 383 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 BPIFA4PQ86YQ2 179 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 DEDD2Q8WXF8 326 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 UHRF2Q96PU4 802 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 NAA50Q9GZZ1 169 aaKnown RBP8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 ARL6Q9H0F7 186 aa8.55□□□□□ -1.04
HLA-DQB3-203ENST00000425319 TRGV2A0A075B6R0 118 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 A0A087X0K7 114 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 LEPP41159 167 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 RAB31Q13636 194 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 TEPPQ6URK8 271 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 ACOT7LQ6ZUV0 252 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 MCFD2Q8NI22 146 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 FRZBQ92765 325 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 ZNF586Q9NXT0 402 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PXMP4Q9Y6I8 212 aa8.54□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PLAC8L1A1L4L8 177 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 ZNF701M0R085 212 aaPredicted RBP8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 SFT2D2O95562 160 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 INPP1P49441 399 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 ERVFC1-1P60608 527 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 SLAQ13239 276 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 ESRGQ1W209 222 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PYDC2Q56P42 97 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 Q6ZRG5 221 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 RNASE8Q8TDE3 154 aaKnown RBP8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 RAB2BQ8WUD1 216 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PYGO2Q9BRQ0 406 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 ARV1Q9H2C2 271 aa8.53□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PMS2P5A8MQ11 134 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 FNDC10F2Z333 226 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 H3BP45 60 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 SIVA1O15304 175 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 INAFM2P0DMQ5 153 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 POLR2GP62487 172 aaKnown RBP eCLIP8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 GUK1Q16774 197 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 CDPF1Q6NVV7 123 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 TMEM182Q6ZP80 229 aaPredicted RBP8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 ZNF546Q86UE3 836 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 C12orf45Q8N5I9 185 aaPredicted RBP8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 BCL7BQ9BQE9 202 aa8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 MRPS26Q9BYN8 205 aaKnown RBP8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 CCDC59Q9P031 241 aaKnown RBP8.52□□□□□ -1.05
HLA-DQB3-203ENST00000425319 COX7A2P2O60397 106 aa8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 S100A5P33763 92 aa8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 TMBIM6P55061 237 aa8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 UBE2MP61081 183 aaKnown RBP8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 RRAS2P62070 204 aaPredicted RBP8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 DAZ2Q13117 558 aaKnown RBP8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 LINC00305Q7Z4B0 112 aa8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 ZNF680Q8NEM1 530 aa8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 SMIM8Q96KF7 97 aa8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 ZNF331Q9NQX6 463 aaPredicted RBP8.51□□□□□ -1.05
HLA-DQB3-203ENST00000425319 PRSS46E5RG02 174 aa8.5□□□□□ -1.05
HLA-DQB3-203ENST00000425319 TNFSF8P32971 234 aa8.5□□□□□ -1.05
HLA-DQB3-203ENST00000425319 ID3Q02535 119 aa8.5□□□□□ -1.05
HLA-DQB3-203ENST00000425319 SPCS2Q15005 226 aa8.5□□□□□ -1.05
HLA-DQB3-203ENST00000425319 C4orf46Q504U0 113 aa8.5□□□□□ -1.05
HLA-DQB3-203ENST00000425319 GGACTQ9BVM4 153 aa8.5□□□□□ -1.05
HLA-DQB3-203ENST00000425319 ICOSQ9Y6W8 199 aa8.5□□□□□ -1.05
HLA-DQB3-203ENST00000425319 TRAV12-3A0A0B4J271 114 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 J3KRW8 73 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 K7EP13 123 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 L7N2F9 121 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 TAS2R30P59541 319 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 VAMP2P63027 116 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 PPP1R1AQ13522 171 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 C10orf113Q5VZT2 155 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 OR1L4Q8NGR5 311 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 C17orf77Q96MU5 243 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 ODF3Q96PU9 254 aa8.49□□□□□ -1.05
HLA-DQB3-203ENST00000425319 RYR1P21817 5038 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 FAT2Q9NYQ8 4349 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 FAM229AH3BQW9 127 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 K7EPK0 472 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 PAX4O43316 350 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 SSSCA1O60232 199 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 SCGB1D2O95969 90 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 SLC25A5P05141 298 aaKnown RBP8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 LINC00315P59091 139 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 KRTAP10-2P60368 255 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 LINC00477Q96M19 166 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms