RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 HIGD1AQ9Y241 93 aa10.38□□□□□ -0.75
ATG4B-209ENST00000425239 STRAPQ9Y3F4 350 aaKnown RBP10.38□□□□□ -0.75
ATG4B-209ENST00000425239 H3BMQ9 156 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 HYPMO75409 117 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 ADAP1O75689 374 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 IL5P05113 134 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 HOXA5P20719 270 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 CDKN1BP46527 198 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 C4orf46Q504U0 113 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 SPATA12Q7Z6I5 190 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 TMEM263Q8WUH6 116 aaKnown RBP10.37□□□□□ -0.75
ATG4B-209ENST00000425239 ZNF503Q96F45 646 aa10.37□□□□□ -0.75
ATG4B-209ENST00000425239 LINC00869P0C866 280 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 HTN1P15515 57 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 S100A7P31151 101 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 RHOBP62745 196 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 ESRGQ1W209 222 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 TMEM14EPQ6UXP3 125 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 TOMM5Q8N4H5 51 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
ATG4B-209ENST00000425239 SMIM8Q96KF7 97 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 UPK3BQ9BT76 320 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 Q9H3A6 140 aa10.36□□□□□ -0.75
ATG4B-209ENST00000425239 ZNF331Q9NQX6 463 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-209ENST00000425239 TRAV26-1A0A087WT03 109 aa10.35□□□□□ -0.75
ATG4B-209ENST00000425239 PRAC2D3DTV9 90 aa10.35□□□□□ -0.75
ATG4B-209ENST00000425239 H7BYZ3 331 aa10.35□□□□□ -0.75
ATG4B-209ENST00000425239 BTF3P20290 206 aaKnown RBP10.35□□□□□ -0.75
ATG4B-209ENST00000425239 FAUP35544 74 aaKnown RBP10.35□□□□□ -0.75
ATG4B-209ENST00000425239 RAP2BP61225 183 aa10.35□□□□□ -0.75
ATG4B-209ENST00000425239 SELENOTP62341 195 aa10.35□□□□□ -0.75
ATG4B-209ENST00000425239 MCFD2Q8NI22 146 aa10.35□□□□□ -0.75
ATG4B-209ENST00000425239 DEDD2Q8WXF8 326 aa10.35□□□□□ -0.75
ATG4B-209ENST00000425239 PARD6GQ9BYG4 376 aaPredicted RBP10.35□□□□□ -0.75
ATG4B-209ENST00000425239 NPVFQ9HCQ7 196 aa10.35□□□□□ -0.75
ATG4B-209ENST00000425239 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 FNDC10F2Z333 226 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 ZNF701M0R085 212 aaPredicted RBP10.34□□□□□ -0.75
ATG4B-209ENST00000425239 OR5G3P0C626 314 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 DLK1P80370 383 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 RXFP4Q8TDU9 374 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 SAT2Q96F10 170 aaPredicted RBP10.34□□□□□ -0.75
ATG4B-209ENST00000425239 C20orf144Q9BQM9 153 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 ARL6Q9H0F7 186 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 ARV1Q9H2C2 271 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 SCRT2Q9NQ03 307 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 PSENENQ9NZ42 101 aa10.34□□□□□ -0.75
ATG4B-209ENST00000425239 VPS13BQ7Z7G8 4022 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 H3BNG1 76 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 SNRPCP09234 159 aaKnown RBP10.33□□□□□ -0.76
ATG4B-209ENST00000425239 M6PRP20645 277 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 AP3S2P59780 193 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 OR5I1Q13606 314 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 PYDC2Q56P42 97 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 GFI1BQ5VTD9 330 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 MORN5Q5VZ52 161 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 TMEM37Q8WXS4 190 aa10.33□□□□□ -0.76
ATG4B-209ENST00000425239 GNPNAT1Q96EK6 184 aaPredicted RBP10.33□□□□□ -0.76
ATG4B-209ENST00000425239 MYCBP2O75592 4640 aa10.32□□□□□ -0.76
ATG4B-209ENST00000425239 A0A1W2PPQ1 181 aa10.32□□□□□ -0.76
ATG4B-209ENST00000425239 SMCO3A2RU48 225 aa10.32□□□□□ -0.76
ATG4B-209ENST00000425239 SLC17A3O00476 420 aa10.32□□□□□ -0.76
ATG4B-209ENST00000425239 CXCL2P19875 107 aa10.32□□□□□ -0.76
ATG4B-209ENST00000425239 UBE2MP61081 183 aaKnown RBP10.32□□□□□ -0.76
ATG4B-209ENST00000425239 RRAS2P62070 204 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-209ENST00000425239 CLINT1Q14677 625 aa10.32□□□□□ -0.76
ATG4B-209ENST00000425239 Q6ZRN7 208 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-209ENST00000425239 CCDC190Q86UF4 302 aa10.32□□□□□ -0.76
ATG4B-209ENST00000425239 A0A0J9YY99 117 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 LINC00854A0A1B0GVQ3 168 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 H3BQ15 152 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 SSSCA1O60232 199 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 METTL15P1P0C7V9 234 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 CT45A10P0DMU9 189 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 IGLC2P0DOY2 106 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 SLC38A11Q08AI6 406 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 TEPPQ6URK8 271 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 LINC00305Q7Z4B0 112 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 LRRC20Q8TCA0 184 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 VSIG2Q96IQ7 327 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 PPP1R14DQ9NXH3 145 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 FLVCR2Q9UPI3 526 aa10.31□□□□□ -0.76
ATG4B-209ENST00000425239 MRPS16Q9Y3D3 137 aaKnown RBP10.31□□□□□ -0.76
ATG4B-209ENST00000425239 AGPAT2O15120 278 aa10.3□□□□□ -0.76
ATG4B-209ENST00000425239 ANXA7P20073 488 aaKnown RBP10.3□□□□□ -0.76
ATG4B-209ENST00000425239 DAZ2Q13117 558 aaKnown RBP10.3□□□□□ -0.76
ATG4B-209ENST00000425239 PXDC1Q5TGL8 231 aa10.3□□□□□ -0.76
ATG4B-209ENST00000425239 OR10J6PQ8NGY7 276 aa10.3□□□□□ -0.76
ATG4B-209ENST00000425239 ZNF431Q8TF32 576 aaPredicted RBP10.3□□□□□ -0.76
ATG4B-209ENST00000425239 SLC50A1Q9BRV3 221 aa10.3□□□□□ -0.76
ATG4B-209ENST00000425239 GAGE12BA1L429 117 aa10.29□□□□□ -0.76
ATG4B-209ENST00000425239 H3BTX0 84 aa10.29□□□□□ -0.76
ATG4B-209ENST00000425239 GAGE7O76087 117 aa10.29□□□□□ -0.76
ATG4B-209ENST00000425239 NDUFB6O95139 128 aa10.29□□□□□ -0.76
ATG4B-209ENST00000425239 GAGE12FP0CL80 117 aa10.29□□□□□ -0.76
ATG4B-209ENST00000425239 GAGE12GP0CL81 117 aa10.29□□□□□ -0.76
ATG4B-209ENST00000425239 GAGE12IP0CL82 117 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms