RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 M0R2P5 195 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 CD3DP04234 171 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 GZMBP10144 247 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 CCL4P13236 92 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 FABP4P15090 132 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 XCL1P47992 114 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 FOXA1P55317 472 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 PCBD1P61457 104 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 BLCAPP62952 87 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 IGLV3-21P80748 117 aaPredicted RBP2.44□□□□□ -2.02
SF3B1-205ENST00000424674 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.44□□□□□ -2.02
SF3B1-205ENST00000424674 Q6AWC8 147 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 OR2T2Q6IF00 324 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 OR5AS1Q8N127 324 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 LINC00574Q9H8X3 128 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 MED9Q9NWA0 146 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 RPL26L1Q9UNX3 145 aaKnown RBP2.44□□□□□ -2.02
SF3B1-205ENST00000424674 KIAA1551Q9HCM1 1747 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 COL2A1P02458 1487 aaPredicted RBP2.44□□□□□ -2.02
SF3B1-205ENST00000424674 TEX14Q8IWB6 1497 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 NRKQ7Z2Y5 1582 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 FANCMQ8IYD8 2048 aa2.44□□□□□ -2.02
SF3B1-205ENST00000424674 BAZ1AQ9NRL2 1556 aaPredicted RBP2.44□□□□□ -2.02
SF3B1-205ENST00000424674 PIKFYVEQ9Y2I7 2098 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 SCN2AQ99250 2005 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 A0A0B4J2C4 111 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 A0A1W2PRS3 328 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 TMEM235A6NFC5 223 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 M0R129 80 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 OR1I1O60431 355 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 SLC25A4P12235 298 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 ETV6P41212 452 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 FXYD2P54710 66 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 KRTAP10-3P60369 221 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 Q6ZR03 302 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 SLC35E3Q7Z769 313 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 CCL4L1Q8NHW4 92 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 CHCHD1Q96BP2 118 aaKnown RBP2.43□□□□□ -2.02
SF3B1-205ENST00000424674 MRPS24Q96EL2 167 aaKnown RBP2.43□□□□□ -2.02
SF3B1-205ENST00000424674 IMMP2LQ96T52 175 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 VAMP8Q9BV40 100 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 PRO1933Q9H354 126 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 BCL2L10Q9HD36 194 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 NUP210LQ5VU65 1888 aa2.43□□□□□ -2.02
SF3B1-205ENST00000424674 ECM29Q5VYK3 1845 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 KIAA1671Q9BY89 1806 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 ATG2AQ2TAZ0 1938 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 MAST2Q6P0Q8 1798 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 CUL7Q14999 1698 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 ADGRL1O94910 1474 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 COL1A1P02452 1464 aaPredicted RBP2.42□□□□□ -2.02
SF3B1-205ENST00000424674 IGLV3-9A0A075B6K5 115 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 TRBV6-6A0A0A6YYG2 114 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 FAM24AA6NFZ4 105 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 G3V3Q6 166 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 H3BPC8 53 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 K7EM74 188 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 TIMM17BO60830 172 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 CPSF4O95639 269 aaKnown RBP2.42□□□□□ -2.02
SF3B1-205ENST00000424674 IGHV3-53P01767 116 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 IGLV7-43P04211 117 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 CKS2P33552 79 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 RPL28P46779 137 aaKnown RBP2.42□□□□□ -2.02
SF3B1-205ENST00000424674 SUPT4H1P63272 117 aaKnown RBP2.42□□□□□ -2.02
SF3B1-205ENST00000424674 ZNF117Q03924 483 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 CIRBPQ14011 172 aaKnown RBP2.42□□□□□ -2.02
SF3B1-205ENST00000424674 ATP11AUNQ6ZP68 121 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 Q8N2B8 174 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 OR5AK2Q8NH90 309 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 OTOSQ8NHW6 89 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 PSMF1Q92530 271 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 RNF5Q99942 180 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 ASF1BQ9NVP2 202 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 BET1LQ9NYM9 111 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 TPRKBQ9Y3C4 175 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 TIMM9Q9Y5J7 89 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 LY96Q9Y6Y9 160 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 SIPA1L1O43166 1804 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 RIMBP3CA6NJZ7 1639 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 RIMBP3BA6NNM3 1639 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 TRPM1Q7Z4N2 1603 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 RIMBP3Q9UFD9 1639 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 NISCHQ9Y2I1 1504 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 RIC1Q4ADV7 1423 aa2.42□□□□□ -2.02
SF3B1-205ENST00000424674 ZNF638Q14966 1978 aaKnown RBP2.41□□□□□ -2.02
SF3B1-205ENST00000424674 IGKV1OR2-108A0A075B7D4 117 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 A0A096LNJ9 63 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 C7orf66A4D0T2 115 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 A8MUU9 505 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 C17orf112F2Z3M2 114 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 GYPBP06028 91 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 IGLC1P0CG04 106 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 FUT5Q11128 374 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 LGALSLQ3ZCW2 172 aaPredicted RBP2.41□□□□□ -2.02
SF3B1-205ENST00000424674 Q5W150 140 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 C2orf91Q6ZV80 131 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 MAPK1IP1LQ8NDC0 245 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 Q8NDZ9 215 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 AQP3Q92482 292 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 HYLS1Q96M11 299 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms