RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 PSG3Q16557 428 aa13□□□□□ -0.33
AC004540.1-203ENST00000421862 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
AC004540.1-203ENST00000421862 SMCO3A2RU48 225 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 CCNKO75909 580 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 CDKN1BP46527 198 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 CCL18P55774 89 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 TMEM14EPQ6UXP3 125 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 ZNF493Q6ZR52 646 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 LINC00612Q8N6U2 182 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 LINC01587Q99440 93 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 TIMM8BQ9Y5J9 83 aaPredicted RBP12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
AC004540.1-203ENST00000421862 C9orf170A2RU37 121 aa12.98□□□□□ -0.33
AC004540.1-203ENST00000421862 OR5G3P0C626 314 aa12.98□□□□□ -0.33
AC004540.1-203ENST00000421862 RHOBP62745 196 aa12.98□□□□□ -0.33
AC004540.1-203ENST00000421862 PATE2Q6UY27 113 aa12.98□□□□□ -0.33
AC004540.1-203ENST00000421862 CCDC190Q86UF4 302 aa12.98□□□□□ -0.33
AC004540.1-203ENST00000421862 SMIM8Q96KF7 97 aa12.98□□□□□ -0.33
AC004540.1-203ENST00000421862 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
AC004540.1-203ENST00000421862 PSENENQ9NZ42 101 aa12.98□□□□□ -0.33
AC004540.1-203ENST00000421862 SSSCA1O60232 199 aa12.97□□□□□ -0.33
AC004540.1-203ENST00000421862 LCN15Q6UWW0 184 aa12.97□□□□□ -0.33
AC004540.1-203ENST00000421862 S100A7AQ86SG5 101 aa12.97□□□□□ -0.33
AC004540.1-203ENST00000421862 RPUSD4Q96CM3 377 aaKnown RBP12.97□□□□□ -0.33
AC004540.1-203ENST00000421862 ARV1Q9H2C2 271 aa12.97□□□□□ -0.33
AC004540.1-203ENST00000421862 ZNF331Q9NQX6 463 aaPredicted RBP12.97□□□□□ -0.33
AC004540.1-203ENST00000421862 RNF24Q9Y225 148 aa12.97□□□□□ -0.33
AC004540.1-203ENST00000421862 H7BYZ3 331 aa12.96□□□□□ -0.33
AC004540.1-203ENST00000421862 PXDC1Q5TGL8 231 aa12.96□□□□□ -0.33
AC004540.1-203ENST00000421862 SSX7Q7RTT5 188 aa12.96□□□□□ -0.33
AC004540.1-203ENST00000421862 ZNF503Q96F45 646 aa12.96□□□□□ -0.33
AC004540.1-203ENST00000421862 SLC50A1Q9BRV3 221 aa12.96□□□□□ -0.33
AC004540.1-203ENST00000421862 KRTAP1-5Q9BYS1 174 aa12.96□□□□□ -0.33
AC004540.1-203ENST00000421862 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
AC004540.1-203ENST00000421862 NPVFQ9HCQ7 196 aa12.96□□□□□ -0.33
AC004540.1-203ENST00000421862 NDUFB6O95139 128 aa12.95□□□□□ -0.34
AC004540.1-203ENST00000421862 RRAS2P62070 204 aaPredicted RBP12.95□□□□□ -0.34
AC004540.1-203ENST00000421862 SLC38A11Q08AI6 406 aa12.95□□□□□ -0.34
AC004540.1-203ENST00000421862 TEPPQ6URK8 271 aa12.95□□□□□ -0.34
AC004540.1-203ENST00000421862 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
AC004540.1-203ENST00000421862 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
AC004540.1-203ENST00000421862 TSC22D2O75157 780 aa12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 METTL15P1P0C7V9 234 aa12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 C4orf46Q504U0 113 aa12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 ZNF546Q86UE3 836 aa12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 MAPKAPK5-AS1Q8N8E1 139 aa12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 UPK3BQ9BT76 320 aa12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 RCL1Q9Y2P8 373 aaKnown RBP12.94□□□□□ -0.34
AC004540.1-203ENST00000421862 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 TAS2R30P59541 319 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 CLINT1Q14677 625 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 KIR3DS1Q14943 382 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 TTC32Q5I0X7 151 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 LRRC20Q8TCA0 184 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 Q9H3A6 140 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 MGAT4CQ9UBM8 478 aa12.93□□□□□ -0.34
AC004540.1-203ENST00000421862 NAP1L6A6NFF2 107 aa12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 SLC17A3O00476 420 aa12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 OR4E1P0C645 316 aa12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 HTN1P15515 57 aa12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 S100A5P33763 92 aa12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 LINC00305Q7Z4B0 112 aa12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 ZBTB8BQ8NAP8 495 aaPredicted RBP12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 RXFP4Q8TDU9 374 aa12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 Q9H8V8 135 aa12.92□□□□□ -0.34
AC004540.1-203ENST00000421862 TRAV26-1A0A087WT03 109 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 H3BNG1 76 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 ZNF701M0R085 212 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 AGPAT2O15120 278 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 M6PRP20645 277 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 HOXA5P20719 270 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 ARL16Q0P5N6 197 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 BPIFA4PQ86YQ2 179 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 GNPNAT1Q96EK6 184 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 ODF3Q96PU9 254 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 GGACTQ9BVM4 153 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 FLVCR2Q9UPI3 526 aa12.91□□□□□ -0.34
AC004540.1-203ENST00000421862 A0A1W2PPQ1 181 aa12.9□□□□□ -0.34
AC004540.1-203ENST00000421862 PRAC2D3DTV9 90 aa12.9□□□□□ -0.34
AC004540.1-203ENST00000421862 BTCP35070 178 aa12.9□□□□□ -0.34
AC004540.1-203ENST00000421862 MORN5Q5VZ52 161 aa12.9□□□□□ -0.34
AC004540.1-203ENST00000421862 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
AC004540.1-203ENST00000421862 Q8N1X5 172 aa12.9□□□□□ -0.34
AC004540.1-203ENST00000421862 TMEM37Q8WXS4 190 aa12.9□□□□□ -0.34
AC004540.1-203ENST00000421862 MGST2Q99735 147 aa12.9□□□□□ -0.34
AC004540.1-203ENST00000421862 GOSR2O14653 212 aa12.89□□□□□ -0.35
AC004540.1-203ENST00000421862 BTF3P20290 206 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-203ENST00000421862 OPCMLQ14982 345 aa12.89□□□□□ -0.35
AC004540.1-203ENST00000421862 IAH1Q2TAA2 248 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-203ENST00000421862 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-203ENST00000421862 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-203ENST00000421862 PXMP4Q9Y6I8 212 aa12.89□□□□□ -0.35
AC004540.1-203ENST00000421862 SCGB1D2O95969 90 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms