RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CFHR1Q03591 330 aa10.03□□□□□ -0.8
CLCN4-203ENST00000421085 IGKV1-16P04430 117 aa10.02□□□□□ -0.8
CLCN4-203ENST00000421085 PRIMA1Q86XR5 153 aa10.02□□□□□ -0.8
CLCN4-203ENST00000421085 SIGLEC9Q9Y336 463 aa10.02□□□□□ -0.8
CLCN4-203ENST00000421085 BRCA1P38398 1863 aaKnown RBP10.02□□□□□ -0.8
CLCN4-203ENST00000421085 LY6G5BQ8NDX9 201 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 PRSS22Q9GZN4 317 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 C3orf36Q3SXR2 165 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 TMEM219Q86XT9 240 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 HS3ST6Q96QI5 342 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 TRAV13-1A0A0B4J241 112 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 VMO1Q7Z5L0 202 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 ZNF114Q8NC26 417 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 SCN10AQ9Y5Y9 1956 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
CLCN4-203ENST00000421085 TMEM75Q8N9X5 138 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
CLCN4-203ENST00000421085 GAFA1Q96PS6 74 aa10.02□□□□□ -0.81
CLCN4-203ENST00000421085 IGKV1D-17A0A075B6S4 117 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 SMIM27A0A1W2PRY6 76 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 ZNF415Q09FC8 603 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 RNF5Q99942 180 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 SHANK2-AS3Q9BTD1 123 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 NRXN2Q9P2S2 1712 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 TMEM178BH3BS89 294 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 PRADC1Q9BSG0 188 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 C6orf226Q5I0X4 101 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 APC2O95996 2303 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 LCTP09848 1927 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 PRSS46E5RG02 174 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 TP53TG1Q9Y2A0 90 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 PLXNA1Q9UIW2 1896 aa10.01□□□□□ -0.81
CLCN4-203ENST00000421085 H3BMG7 143 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 CT83Q5H943 113 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 AHCTF1Q8WYP5 2266 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 TRGV1A0A0A0MS02 117 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 TRBV7-1A0A0A6YYK4 115 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 K7ERJ3 54 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 ZNF883P0CG24 379 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 C5orf64Q2M2E5 130 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 CEND1Q8N111 149 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 COLQQ9Y215 455 aaPredicted RBP10□□□□□ -0.81
CLCN4-203ENST00000421085 NEGR1Q7Z3B1 354 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 BUB1B-PAK6H3BSN5 160 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 MMP23AO75900 390 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 Q8N8P6 123 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 CEP290O15078 2479 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 SDK2Q58EX2 2172 aa10□□□□□ -0.81
CLCN4-203ENST00000421085 ANAPC10Q9UM13 185 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 LGALS9BQ3B8N2 356 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 MRPL51Q4U2R6 128 aaKnown RBP9.99□□□□□ -0.81
CLCN4-203ENST00000421085 MORN5Q5VZ52 161 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 LGALS9CQ6DKI2 356 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 VWC2Q2TAL6 325 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 ZNF672Q499Z4 452 aaPredicted RBP9.99□□□□□ -0.81
CLCN4-203ENST00000421085 C2orf66Q6UXQ4 117 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 Q6ZVH6 145 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 A0A087WX48 190 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 FGF6P10767 208 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 ASPHD1Q5U4P2 390 aa9.99□□□□□ -0.81
CLCN4-203ENST00000421085 PDE6HQ13956 83 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 INS-IGF2F8WCM5 200 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 INSP01308 110 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 HAPLN4Q86UW8 402 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 A0A1W2PPI3 338 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 ZFP36L1Q07352 338 aaKnown RBP9.98□□□□□ -0.81
CLCN4-203ENST00000421085 SOCS3O14543 225 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 CDKN1BP46527 198 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 THSD7AQ9UPZ6 1657 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 C11orf44Q8N8P7 122 aa9.98□□□□□ -0.81
CLCN4-203ENST00000421085 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 PRDM6Q9NQX0 595 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 TMEM14BQ9NUH8 114 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 ZNRD1Q9P1U0 126 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 FOXL2NBQ6ZUU3 175 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 DTX2Q86UW9 622 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 SIGLEC8Q9NYZ4 499 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 DOCK11Q5JSL3 2073 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 TRAV26-2A0A0B4J265 109 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 DOCK3Q8IZD9 2030 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 PMVKQ15126 192 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 AMTNQ6UX39 209 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 SIPA1L1O43166 1804 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 WIPF3A6NGB9 483 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 FAM231DQ6ZW35 169 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
CLCN4-203ENST00000421085 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
CLCN4-203ENST00000421085 VGLL1Q99990 258 aa9.96□□□□□ -0.81
CLCN4-203ENST00000421085 IL17RELQ6ZVW7 336 aa9.96□□□□□ -0.81
CLCN4-203ENST00000421085 SPACA3Q8IXA5 215 aa9.96□□□□□ -0.81
CLCN4-203ENST00000421085 IGLC7A0M8Q6 106 aa9.96□□□□□ -0.82
CLCN4-203ENST00000421085 IGKV1-39P01597 117 aa9.96□□□□□ -0.82
CLCN4-203ENST00000421085 TRACP01848 142 aa9.96□□□□□ -0.82
CLCN4-203ENST00000421085 IGKV1D-39P04432 117 aa9.96□□□□□ -0.82
CLCN4-203ENST00000421085 MINOS1Q5TGZ0 78 aa9.96□□□□□ -0.82
CLCN4-203ENST00000421085 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
CLCN4-203ENST00000421085 MINOS1-NBL1R4GNA1 71 aa9.96□□□□□ -0.82
CLCN4-203ENST00000421085 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms