RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SHANK2-AS3Q9BTD1 123 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 SSBP4Q9BWG4 385 aaPredicted RBP6.86□□□□□ -1.31
SNCA-206ENST00000420646 TOMM40O96008 361 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 CLEC19AQ6UXS0 136 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 REC114Q7Z4M0 266 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 BTF3L4Q96K17 158 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 NEU1Q99519 415 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 NAT8BQ9UHF3 227 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 TP53TG3Q9ULZ0 132 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 TBL2Q9Y4P3 447 aaKnown RBP6.86□□□□□ -1.31
SNCA-206ENST00000420646 LY96Q9Y6Y9 160 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 TRBV19A0A075B6N1 114 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 OOSP1A8MZH6 123 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 HIST1H1EP10412 219 aaKnown RBP6.85□□□□□ -1.31
SNCA-206ENST00000420646 CAMPP49913 170 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 BLCAPP62952 87 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 RPL19P84098 196 aaKnown RBP6.85□□□□□ -1.31
SNCA-206ENST00000420646 TMEM183BQ1AE95 376 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 C5orf17Q8NAS9 161 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 OSTCQ9NRP0 149 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 HIF1ANQ9NWT6 349 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 IGHV1-69DA0A0B4J2H0 117 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 ZNF705FA8MVS1 300 aaPredicted RBP6.85□□□□□ -1.31
SNCA-206ENST00000420646 H3BRN7 92 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 TGOLN2O43493 480 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 IGHV1-69P01742 117 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 HLA-DRB1P01911 266 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 IGLC2P0DOY2 106 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 DDTP30046 118 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 GDF5OSQ5U4N7 250 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 BPIFA4PQ86YQ2 179 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 CMTM2Q8TAZ6 248 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 SRSF8Q9BRL6 282 aaKnown RBP6.85□□□□□ -1.31
SNCA-206ENST00000420646 C1RLQ9NZP8 487 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 WI2-2373I1.2A0A1W2PRP0 233 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 ZNF785A8K8V0 405 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 HIGD1CA8MV81 97 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 IGLV2-11P01706 119 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 APOHP02749 345 aaPredicted RBP6.85□□□□□ -1.31
SNCA-206ENST00000420646 C5orf56Q8N8D9 126 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 NUP35Q8NFH5 326 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 ZNF414Q96IQ9 312 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 GPR82Q96P67 336 aa6.85□□□□□ -1.31
SNCA-206ENST00000420646 PRRC2AP48634 2157 aaKnown RBP6.84□□□□□ -1.31
SNCA-206ENST00000420646 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 H3BUX3 64 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 LINC00310P59036 64 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 PKIAP61925 76 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 SLAQ13239 276 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 SIGLEC15Q6ZMC9 328 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 SMIM27A0A1W2PRY6 76 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 MRPS12O15235 138 aaKnown RBP6.84□□□□□ -1.31
SNCA-206ENST00000420646 YPEL3P61236 119 aaPredicted RBP6.84□□□□□ -1.31
SNCA-206ENST00000420646 OR4F17Q8NGA8 305 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 CCDC140Q96MF4 163 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 THYN1Q9P016 225 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 KLF12Q9Y4X4 402 aa6.84□□□□□ -1.31
SNCA-206ENST00000420646 FLNAP21333 2647 aaKnown RBP6.84□□□□□ -1.31
SNCA-206ENST00000420646 TRBV12-3P01733 135 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 LBHQ53QV2 105 aaPredicted RBP6.83□□□□□ -1.32
SNCA-206ENST00000420646 TOMM20LQ6UXN7 152 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 TMEM136Q6ZRR5 245 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 GTSF1Q8WW33 167 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 SMAD5-AS1Q9Y6J3 95 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 IGKV2-40A0A087WW87 121 aaPredicted RBP6.83□□□□□ -1.32
SNCA-206ENST00000420646 MUC21A0A0G2JKD1 596 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 MUC21A0A140T8X8 626 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 SERF1AO75920 110 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 LTAP01374 205 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 IGKV2D-40P01614 121 aaPredicted RBP6.83□□□□□ -1.32
SNCA-206ENST00000420646 IGHV3-11P01762 117 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 MSMBP08118 114 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 TMEM95Q3KNT9 176 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 MUC21Q5SSG8 566 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 DNLZQ5SXM8 178 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 Q8TAT8 98 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 PGLYRP4Q96LB8 373 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 C8orf49Q96NF6 230 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 RCHY1Q96PM5 261 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 OTORQ9NRC9 128 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 CRISP2P16562 243 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 IQCJQ1A5X6 159 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 RNF182Q8N6D2 247 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 OR2D3Q8NGH3 330 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 MBD6Q96DN6 1003 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 ZC2HC1AQ96GY0 325 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 KLK15Q9H2R5 256 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 TMEM14CQ9P0S9 112 aa6.83□□□□□ -1.32
SNCA-206ENST00000420646 TMSB15BA0A087X1C1 80 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 PAX1P15863 534 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 Q86TA4 180 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 OR5R1Q8NH85 324 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 FAM110DQ8TAY7 271 aaPredicted RBP6.82□□□□□ -1.32
SNCA-206ENST00000420646 ZNF502Q8TBZ5 544 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 C2orf88Q9BSF0 95 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 TPPP3Q9BW30 176 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 SRIP30626 198 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 CRIP1P50238 77 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 ANKRD39Q53RE8 183 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms