RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 EIF5A2Q9GZV4 153 aaKnown RBP7.32□□□□□ -1.24
RIF1-202ENST00000414861 PEMTQ9UBM1 199 aa7.32□□□□□ -1.24
RIF1-202ENST00000414861 IGKV3-7A0A075B6H7 116 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 RAB19A4D1S5 217 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 IFNA1P01562 189 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 ATF4P18848 351 aaPredicted RBP7.31□□□□□ -1.24
RIF1-202ENST00000414861 GALR1P47211 349 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 CD81P60033 236 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 RANP62826 216 aaKnown RBP7.31□□□□□ -1.24
RIF1-202ENST00000414861 IGFL4Q6B9Z1 124 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 TCF24Q7RTU0 167 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 LINC00482Q8N8I6 264 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 GRAMD2BQ96HH9 432 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 GPR82Q96P67 336 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 CMYA5Q8N3K9 4069 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 A0A087X0K7 114 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 ZNF785A8K8V0 405 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 C11orf94C9JXX5 98 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 CD5P06127 495 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 MEF2BQ02080 365 aaPredicted RBP7.31□□□□□ -1.24
RIF1-202ENST00000414861 NDUFA5Q16718 116 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 FAM90A2PQ658T7 463 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 C3orf56Q8N813 242 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 VAX2Q9UIW0 290 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 RNF24Q9Y225 148 aa7.31□□□□□ -1.24
RIF1-202ENST00000414861 A0A1W2PRE2 83 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 HLA-DMBP28068 263 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 PPT1P50897 306 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 RPL11P62913 178 aaKnown RBP7.3□□□□□ -1.24
RIF1-202ENST00000414861 C12orf54Q6X4T0 127 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 EIF4E3Q8N5X7 224 aaKnown RBP7.3□□□□□ -1.24
RIF1-202ENST00000414861 Q9H3A6 140 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 CCDC28AQ8IWP9 274 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 GBGT1Q8N5D6 347 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 TREM1Q9NP99 234 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 ARL2-SNX15V9GYD0 113 aa7.3□□□□□ -1.24
RIF1-202ENST00000414861 TRAV8-2A0A0B4J237 113 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 SOCS3O14543 225 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 BMI1P35226 326 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 SUMO1P63165 101 aaKnown RBP7.29□□□□□ -1.24
RIF1-202ENST00000414861 GNG5P63218 68 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 PDE6HQ13956 83 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 TMEM61Q8N0U2 210 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 MDFIQ99750 246 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 ZNF331Q9NQX6 463 aaPredicted RBP7.29□□□□□ -1.24
RIF1-202ENST00000414861 SCO2A0A1W2PP80 73 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 HELTA6NFD8 242 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 M0QZ24 198 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 M0R3E3 92 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 SRP19P09132 144 aaKnown RBP7.29□□□□□ -1.24
RIF1-202ENST00000414861 RNF182Q8N6D2 247 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 CYB561D1Q8N8Q1 229 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 NRN1Q9NPD7 142 aa7.29□□□□□ -1.24
RIF1-202ENST00000414861 PGPA6NDG6 321 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 PEA15Q15121 130 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 DEFB114Q30KQ6 69 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 CD300EQ496F6 205 aaPredicted RBP7.28□□□□□ -1.24
RIF1-202ENST00000414861 UQCC3Q6UW78 93 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 DYNLRB2Q8TF09 96 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 DCANP1Q8TF63 244 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 MS4A6AQ9H2W1 248 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 IZUMO1RA6ND01 250 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 ZNF253O75346 499 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 SAP30O75446 220 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 TAGLN2P37802 199 aaKnown RBP7.28□□□□□ -1.24
RIF1-202ENST00000414861 TFPI2P48307 235 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 SHISA2Q6UWI4 295 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 FAM24BQ8N5W8 94 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 C20orf173Q96LM9 149 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 DERL1Q9BUN8 251 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 OTORQ9NRC9 128 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 AGRNO00468 2067 aa7.28□□□□□ -1.24
RIF1-202ENST00000414861 ATP6V1G1O75348 118 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 SFTA3P0C7M3 94 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 ADCYAP1P18509 176 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 CEBPGP53567 150 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 WFDC3Q8IUB2 231 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 SIGLEC8Q9NYZ4 499 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 RPH3ALQ9UNE2 315 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 ZNF705FA8MVS1 300 aaPredicted RBP7.27□□□□□ -1.25
RIF1-202ENST00000414861 SLC25A5P05141 298 aaKnown RBP7.27□□□□□ -1.25
RIF1-202ENST00000414861 LYPD1Q8N2G4 141 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 C16orf92Q96LL3 132 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 SLC50A1Q9BRV3 221 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 SLC35B3Q9H1N7 401 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 PKD1L1Q8TDX9 2849 aa7.27□□□□□ -1.25
RIF1-202ENST00000414861 MEOX2P50222 304 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 DEFB1P60022 68 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 PSG9Q00887 426 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 C5orf17Q8NAS9 161 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 C11orf52Q96A22 123 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 LINC00479Q96M42 142 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 LINC00052Q96N35 136 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 TXNDC17Q9BRA2 123 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 AAMDCQ9H7C9 122 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 TMEM218A2RU14 115 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 TMEM250H0YL14 139 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 K7EQG2 157 aa7.26□□□□□ -1.25
RIF1-202ENST00000414861 PDE6DO43924 150 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms