RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ZNF329Q86UD4 541 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 OVOL2Q9BRP0 275 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 NLRC5Q86WI3 1866 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 VWC2LB2RUY7 222 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 SLAQ13239 276 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 ARHGEF17Q96PE2 2063 aaPredicted RBP11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 MYLKQ15746 1914 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 ZNF688P0C7X2 276 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 GFRA4Q9GZZ7 299 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 TRBV20-1A0A075B6N2 111 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 IGKV1-6A0A0C4DH72 117 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 PFN1P07737 140 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 CEACAM8P31997 349 aaPredicted RBP11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 RPL15P61313 204 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 C1orf147Q96MC9 270 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 THADAQ6YHU6 1953 aa11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 SH2D1AO60880 128 aa11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 CRPP02741 224 aa11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 SVILO95425 2214 aa11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 MMP23AO75900 390 aa11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 BVES-AS1Q5T3Y7 98 aa11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 TMEM158Q8WZ71 300 aa11.15□□□□□ -0.62
SMARCA4-202ENST00000413806 CMC4P56277 68 aaPredicted RBP11.15□□□□□ -0.63
SMARCA4-202ENST00000413806 KLRD1Q13241 179 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 ZNF474Q6S9Z5 364 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 TCF20Q9UGU0 1960 aaKnown RBP11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 WDR81Q562E7 1941 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 SMIM20Q8N5G0 67 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 MGAMO43451 1857 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 PTPRDP23468 1912 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 FAM223BA6NKX1 122 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 FAM223AQ8IWN6 122 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 COL4A6Q14031 1691 aa11.14□□□□□ -0.63
SMARCA4-202ENST00000413806 TEX43Q6ZNM6 134 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 Q8TCH9 128 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 SPANXCQ9NY87 97 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 LINC00158P58513 81 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 C18orf32Q8TCD1 76 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 KLF2Q9Y5W3 355 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 PLXNA2O75051 1894 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 CCL25O15444 150 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 IGLL1P15814 213 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 TCF15Q12870 199 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 USMG5Q96IX5 58 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 CDPF1Q6NVV7 123 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 Q86TA4 180 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 COX8AP10176 69 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 PDE6HQ13956 83 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 TMEM86BQ8N661 226 aa11.13□□□□□ -0.63
SMARCA4-202ENST00000413806 A0A1W2PRX2 142 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 GATA4P43694 442 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 PMVKQ15126 192 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 DNAJC13O75165 2243 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 PRSS57Q6UWY2 283 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 DPH3P1Q9H4G8 78 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 TMEM14BQ9NUH8 114 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 ZNF492Q9P255 531 aa11.12□□□□□ -0.63
SMARCA4-202ENST00000413806 CT83Q5H943 113 aa11.11□□□□□ -0.63
SMARCA4-202ENST00000413806 C1orf43Q9BWL3 253 aa11.11□□□□□ -0.63
SMARCA4-202ENST00000413806 TMEM126AQ9H061 195 aa11.11□□□□□ -0.63
SMARCA4-202ENST00000413806 PROK2Q9HC23 129 aa11.11□□□□□ -0.63
SMARCA4-202ENST00000413806 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-202ENST00000413806 LYPD2Q6UXB3 125 aa11.11□□□□□ -0.63
SMARCA4-202ENST00000413806 PRB4P10163 310 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-202ENST00000413806 LINC00205P59089 165 aa11.11□□□□□ -0.63
SMARCA4-202ENST00000413806 MALP21145 153 aa11.1□□□□□ -0.63
SMARCA4-202ENST00000413806 DNAJC30Q96LL9 226 aa11.1□□□□□ -0.63
SMARCA4-202ENST00000413806 LY6G6EA0A0G2JKS1 128 aa11.1□□□□□ -0.63
SMARCA4-202ENST00000413806 U3KQA8 63 aa11.1□□□□□ -0.63
SMARCA4-202ENST00000413806 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
SMARCA4-202ENST00000413806 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
SMARCA4-202ENST00000413806 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
SMARCA4-202ENST00000413806 B4DSR2 109 aa11.1□□□□□ -0.63
SMARCA4-202ENST00000413806 PAX9P55771 341 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 LINC00527Q9UJ94 153 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 IGLC7A0M8Q6 106 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 H3BMG7 143 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 INAFM2P0DMQ5 153 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 TPRP12270 2363 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 LY6DQ14210 128 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 ZNF833PQ6ZTB9 187 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 TMEM219Q86XT9 240 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 RNASE8Q8TDE3 154 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 COL8A2P25067 703 aa11.09□□□□□ -0.63
SMARCA4-202ENST00000413806 A0A1W2PPI3 338 aa11.08□□□□□ -0.64
SMARCA4-202ENST00000413806 Q6ZVH6 145 aa11.08□□□□□ -0.64
SMARCA4-202ENST00000413806 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
SMARCA4-202ENST00000413806 VCYO14598 125 aa11.08□□□□□ -0.64
SMARCA4-202ENST00000413806 UTF1Q5T230 341 aa11.08□□□□□ -0.64
SMARCA4-202ENST00000413806 CEND1Q8N111 149 aa11.08□□□□□ -0.64
SMARCA4-202ENST00000413806 NDUFA4L2Q9NRX3 87 aa11.08□□□□□ -0.64
SMARCA4-202ENST00000413806 LEPROTO15243 131 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms