RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PMS2P5A8MQ11 134 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 EPM2AB3EWF7 344 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 WRBO00258 174 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 PRB4P10163 310 aaPredicted RBP8.37□□□□□ -1.07
LIMS2-210ENST00000413578 HTN1P15515 57 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 RAP2BP61225 183 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 AKR1C1Q04828 323 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 OR5I1Q13606 314 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 RPUSD4Q96CM3 377 aaKnown RBP8.37□□□□□ -1.07
LIMS2-210ENST00000413578 C20orf144Q9BQM9 153 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 ZNF586Q9NXT0 402 aa8.37□□□□□ -1.07
LIMS2-210ENST00000413578 RSL24D1Q9UHA3 163 aaKnown RBP8.37□□□□□ -1.07
LIMS2-210ENST00000413578 A0A0J9YY99 117 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 H3BP45 60 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 K7EPK0 472 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 HYPMO75409 117 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 IL5P05113 134 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 LINC00869P0C866 280 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 XGP55808 180 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 LINC00315P59091 139 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 SPANXN5Q5MJ07 72 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 PATE2Q6UY27 113 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 LYPD1Q8N2G4 141 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 DYNC2LI1Q8TCX1 351 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 TRIM63Q969Q1 353 aa8.36□□□□□ -1.07
LIMS2-210ENST00000413578 ZNF331Q9NQX6 463 aaPredicted RBP8.36□□□□□ -1.07
LIMS2-210ENST00000413578 CCDC59Q9P031 241 aaKnown RBP8.36□□□□□ -1.07
LIMS2-210ENST00000413578 CXCL2P19875 107 aa8.35□□□□□ -1.07
LIMS2-210ENST00000413578 SELENOTP62341 195 aa8.35□□□□□ -1.07
LIMS2-210ENST00000413578 DLK1P80370 383 aa8.35□□□□□ -1.07
LIMS2-210ENST00000413578 ID3Q02535 119 aa8.35□□□□□ -1.07
LIMS2-210ENST00000413578 GFI1BQ5VTD9 330 aa8.35□□□□□ -1.07
LIMS2-210ENST00000413578 TMED4Q7Z7H5 227 aa8.35□□□□□ -1.07
LIMS2-210ENST00000413578 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
LIMS2-210ENST00000413578 PPP1R14DQ9NXH3 145 aa8.35□□□□□ -1.07
LIMS2-210ENST00000413578 STRAPQ9Y3F4 350 aaKnown RBP8.35□□□□□ -1.07
LIMS2-210ENST00000413578 A0A096LPF7 62 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 GAGE12BA1L429 117 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 ADAP1O75689 374 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 GAGE7O76087 117 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 SFT2D2O95562 160 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 GAGE12FP0CL80 117 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 GAGE12GP0CL81 117 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 GAGE12IP0CL82 117 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 VAMP1P23763 118 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 DAZ2Q13117 558 aaKnown RBP8.34□□□□□ -1.07
LIMS2-210ENST00000413578 PPP1R1AQ13522 171 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 ZBTB8BQ8NAP8 495 aaPredicted RBP8.34□□□□□ -1.07
LIMS2-210ENST00000413578 C18orf15Q96N68 181 aa8.34□□□□□ -1.07
LIMS2-210ENST00000413578 PARD6GQ9BYG4 376 aaPredicted RBP8.34□□□□□ -1.07
LIMS2-210ENST00000413578 DNAH8Q96JB1 4490 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 SMCO3A2RU48 225 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 PRAC2D3DTV9 90 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 RLN2P04090 185 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 OR5G3P0C626 314 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 LCN15Q6UWW0 184 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 SLIRPQ9GZT3 109 aaKnown RBP8.33□□□□□ -1.08
LIMS2-210ENST00000413578 ARV1Q9H2C2 271 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 TMPRSS5Q9H3S3 457 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
LIMS2-210ENST00000413578 FNDC10F2Z333 226 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 SLC17A3O00476 420 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 CCNKO75909 580 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 HOXB5P09067 269 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 TNFSF8P32971 234 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 POLR2GP62487 172 aaKnown RBP eCLIP8.32□□□□□ -1.08
LIMS2-210ENST00000413578 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 TMEM14EPQ6UXP3 125 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 Q6ZTI0 123 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 CCDC28AQ8IWP9 274 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 LRRC20Q8TCA0 184 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 SLC25A21Q9BQT8 299 aaPredicted RBP8.32□□□□□ -1.08
LIMS2-210ENST00000413578 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 ARL6Q9H0F7 186 aa8.32□□□□□ -1.08
LIMS2-210ENST00000413578 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
LIMS2-210ENST00000413578 LINC00854A0A1B0GVQ3 168 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 FABP12A6NFH5 140 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 SNURFLB1AK76 121 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 SNRPCP09234 159 aaKnown RBP8.31□□□□□ -1.08
LIMS2-210ENST00000413578 FAUP35544 74 aaKnown RBP8.31□□□□□ -1.08
LIMS2-210ENST00000413578 FUSP35637 526 aaKnown RBP eCLIP8.31□□□□□ -1.08
LIMS2-210ENST00000413578 PXDC1Q5TGL8 231 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 Q5VSD8 79 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 S100A7AQ86SG5 101 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 ZNF431Q8TF32 576 aaPredicted RBP8.31□□□□□ -1.08
LIMS2-210ENST00000413578 SAT2Q96F10 170 aaPredicted RBP8.31□□□□□ -1.08
LIMS2-210ENST00000413578 ODF3Q96PU9 254 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 NPVFQ9HCQ7 196 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 PSENENQ9NZ42 101 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 RNF24Q9Y225 148 aa8.31□□□□□ -1.08
LIMS2-210ENST00000413578 NPIPB6E9PJ23 425 aa8.3□□□□□ -1.08
LIMS2-210ENST00000413578 SIVA1O15304 175 aa8.3□□□□□ -1.08
LIMS2-210ENST00000413578 CT45A10P0DMU9 189 aa8.3□□□□□ -1.08
LIMS2-210ENST00000413578 IGLC2P0DOY2 106 aa8.3□□□□□ -1.08
LIMS2-210ENST00000413578 AP3S2P59780 193 aa8.3□□□□□ -1.08
LIMS2-210ENST00000413578 RRAS2P62070 204 aaPredicted RBP8.3□□□□□ -1.08
LIMS2-210ENST00000413578 SLC38A11Q08AI6 406 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms