RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 ISLRO14498 428 aa14.06□□□□□ -0.16
CDC42-204ENST00000411827 TAGLN2P37802 199 aaKnown RBP14.06□□□□□ -0.16
CDC42-204ENST00000411827 ID1P41134 155 aa14.06□□□□□ -0.16
CDC42-204ENST00000411827 PSG9Q00887 426 aa14.06□□□□□ -0.16
CDC42-204ENST00000411827 TMEM61Q8N0U2 210 aa14.06□□□□□ -0.16
CDC42-204ENST00000411827 FXYD5Q96DB9 178 aa14.06□□□□□ -0.16
CDC42-204ENST00000411827 TRBV19A0A075B6N1 114 aa14.05□□□□□ -0.16
CDC42-204ENST00000411827 EDN2P20800 178 aa14.05□□□□□ -0.16
CDC42-204ENST00000411827 LYPD6BQ8NI32 183 aa14.05□□□□□ -0.16
CDC42-204ENST00000411827 MS4A6AQ9H2W1 248 aa14.05□□□□□ -0.16
CDC42-204ENST00000411827 SMAD5-AS1Q9Y6J3 95 aa14.05□□□□□ -0.16
CDC42-204ENST00000411827 IGLL1P15814 213 aa14.04□□□□□ -0.16
CDC42-204ENST00000411827 SNRPD3P62318 126 aaKnown RBP14.04□□□□□ -0.16
CDC42-204ENST00000411827 ARL6IP6Q8N6S5 226 aa14.04□□□□□ -0.16
CDC42-204ENST00000411827 ZNF503Q96F45 646 aa14.04□□□□□ -0.16
CDC42-204ENST00000411827 FAM110AQ9BQ89 295 aa14.04□□□□□ -0.16
CDC42-204ENST00000411827 PRELID1Q9Y255 219 aa14.04□□□□□ -0.16
CDC42-204ENST00000411827 A0A1W2PRE2 83 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 H3BQ15 152 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 RGS13O14921 159 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 HMGB3O15347 200 aaKnown RBP14.03□□□□□ -0.16
CDC42-204ENST00000411827 IFNA1P01562 189 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 PYYP10082 97 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 SSX7Q7RTT5 188 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 DCANP1Q8TF63 244 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 TXNDC17Q9BRA2 123 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 AAMDCQ9H7C9 122 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 MANBALQ9NQG1 85 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 ZNF586Q9NXT0 402 aa14.03□□□□□ -0.16
CDC42-204ENST00000411827 K7EQG2 157 aa14.02□□□□□ -0.17
CDC42-204ENST00000411827 OR10J4P0C629 311 aa14.02□□□□□ -0.17
CDC42-204ENST00000411827 IFITM2Q01629 132 aa14.02□□□□□ -0.17
CDC42-204ENST00000411827 IQCF2Q8IXL9 164 aa14.02□□□□□ -0.17
CDC42-204ENST00000411827 MRPL53Q96EL3 112 aaKnown RBP14.02□□□□□ -0.17
CDC42-204ENST00000411827 C16orf92Q96LL3 132 aa14.02□□□□□ -0.17
CDC42-204ENST00000411827 TCEAL7Q9BRU2 100 aa14.02□□□□□ -0.17
CDC42-204ENST00000411827 GUCA2BQ16661 112 aa14.01□□□□□ -0.17
CDC42-204ENST00000411827 ZNF331Q9NQX6 463 aaPredicted RBP14.01□□□□□ -0.17
CDC42-204ENST00000411827 VWFP04275 2813 aa14□□□□□ -0.17
CDC42-204ENST00000411827 NMBP08949 121 aa14□□□□□ -0.17
CDC42-204ENST00000411827 FGF8P55075 233 aaPredicted RBP14□□□□□ -0.17
CDC42-204ENST00000411827 BEAN1Q3B7T3 259 aa14□□□□□ -0.17
CDC42-204ENST00000411827 CLLU1Q5K131 121 aa14□□□□□ -0.17
CDC42-204ENST00000411827 RXFP4Q8TDU9 374 aa14□□□□□ -0.17
CDC42-204ENST00000411827 BLNKQ8WV28 456 aa14□□□□□ -0.17
CDC42-204ENST00000411827 OTORQ9NRC9 128 aa14□□□□□ -0.17
CDC42-204ENST00000411827 SOCS3O14543 225 aa13.99□□□□□ -0.17
CDC42-204ENST00000411827 EGFEM1PQ0D2K5 195 aa13.99□□□□□ -0.17
CDC42-204ENST00000411827 GBGT1Q8N5D6 347 aa13.99□□□□□ -0.17
CDC42-204ENST00000411827 ZNF256Q9Y2P7 627 aaPredicted RBP13.99□□□□□ -0.17
CDC42-204ENST00000411827 IGKV3-7A0A075B6H7 116 aa13.98□□□□□ -0.17
CDC42-204ENST00000411827 NDUFB4O95168 129 aa13.98□□□□□ -0.17
CDC42-204ENST00000411827 CSN1S1P47710 185 aa13.98□□□□□ -0.17
CDC42-204ENST00000411827 RANP62826 216 aaKnown RBP13.98□□□□□ -0.17
CDC42-204ENST00000411827 GTSCR1Q86UQ5 136 aa13.98□□□□□ -0.17
CDC42-204ENST00000411827 C17orf77Q96MU5 243 aa13.98□□□□□ -0.17
CDC42-204ENST00000411827 NOTCH3Q9UM47 2321 aa13.98□□□□□ -0.17
CDC42-204ENST00000411827 NDUFS6O75380 124 aaKnown RBP13.97□□□□□ -0.17
CDC42-204ENST00000411827 PSG3Q16557 428 aa13.97□□□□□ -0.17
CDC42-204ENST00000411827 SAMD5Q5TGI4 173 aa13.97□□□□□ -0.17
CDC42-204ENST00000411827 WFDC3Q8IUB2 231 aa13.97□□□□□ -0.17
CDC42-204ENST00000411827 SERTM2A0A1B0GWG4 89 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 IZUMO1RA6ND01 250 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 EIF3GO75821 320 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDC42-204ENST00000411827 TFPI2P48307 235 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 OXLD1Q5BKU9 147 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 C5orf17Q8NAS9 161 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 CMTM2Q8TAZ6 248 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 Q9H3A6 140 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 TMPRSS5Q9H3S3 457 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 GNG13Q9P2W3 67 aa13.96□□□□□ -0.17
CDC42-204ENST00000411827 FAM74A7A6NL05 159 aa13.95□□□□□ -0.18
CDC42-204ENST00000411827 F6UZH7 168 aa13.95□□□□□ -0.18
CDC42-204ENST00000411827 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
CDC42-204ENST00000411827 VAX2Q9UIW0 290 aa13.95□□□□□ -0.18
CDC42-204ENST00000411827 TRAV8-2A0A0B4J237 113 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 A0A1B0GV50 99 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 PGPA6NDG6 321 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 FBLL1A6NHQ2 334 aaKnown RBP13.94□□□□□ -0.18
CDC42-204ENST00000411827 OR11H12B2RN74 326 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 SLC17A3O00476 420 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 BCL2P10415 239 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 CCL20P78556 96 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 ICAM4Q14773 271 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 CST9LP1Q5W188 147 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 TRRAPQ9Y4A5 3859 aa13.94□□□□□ -0.18
CDC42-204ENST00000411827 H3BTX0 84 aa13.93□□□□□ -0.18
CDC42-204ENST00000411827 K7EQM0 130 aa13.93□□□□□ -0.18
CDC42-204ENST00000411827 PAGE4O60829 102 aa13.93□□□□□ -0.18
CDC42-204ENST00000411827 ZNF688P0C7X2 276 aa13.93□□□□□ -0.18
CDC42-204ENST00000411827 SUMO1P63165 101 aaKnown RBP13.93□□□□□ -0.18
CDC42-204ENST00000411827 HIST1H2BAQ96A08 127 aa13.93□□□□□ -0.18
CDC42-204ENST00000411827 RPUSD4Q96CM3 377 aaKnown RBP13.93□□□□□ -0.18
CDC42-204ENST00000411827 LINC00052Q96N35 136 aa13.93□□□□□ -0.18
CDC42-204ENST00000411827 MED9Q9NWA0 146 aa13.93□□□□□ -0.18
CDC42-204ENST00000411827 RBFOX3A6NFN3 312 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 PDE6DO43924 150 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 UBE2G2P60604 165 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 MEF2BQ02080 365 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms