RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 J3KRW8 73 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 K7EQD1 137 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 TNFAIP8O95379 198 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGLV2-11P01706 119 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGLV2-8P01709 118 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGHV3-53P01767 116 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 ORM1P02763 201 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 SULT1A3P0DMM9 295 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 SULT1A4P0DMN0 295 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 PRB4P10163 310 aaPredicted RBP1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 GYPEP15421 78 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 AKR1C4P17516 323 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 TNFSF8P32971 234 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 LEPP41159 167 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 CRYBA4P53673 196 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 TCL1AP56279 114 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 RAP2BP61225 183 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 RPL37AP61513 92 aaKnown RBP1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 RAB11AP62491 216 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 MEF2DQ14814 521 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 RNASE10Q5GAN6 216 aaKnown RBP1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 LINC01556Q5JQF7 62 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 UBE2NLQ5JXB2 153 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 GFI1BQ5VTD9 330 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 MORN5Q5VZ52 161 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 SH2D6Q7Z4S9 175 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 LHFPL1Q86WI0 220 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 SAMD12Q8N8I0 201 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 THAP8Q8NA92 274 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 C11orf72Q8NBR9 251 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 BPIFCQ8NFQ6 507 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR1S1Q8NH92 325 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 TERB2Q8NHR7 220 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 CIRBP-AS1Q8TBR5 109 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 DTD1Q8TEA8 209 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 GPX8Q8TED1 209 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 ZNF431Q8TF32 576 aaPredicted RBP1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 GLYATL2Q8WU03 294 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 TMEM37Q8WXS4 190 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 IL22RA2Q969J5 263 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 C8orf49Q96NF6 230 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 ODF3Q96PU9 254 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 VGLL1Q99990 258 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 TXNDC17Q9BRA2 123 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 SLC50A1Q9BRV3 221 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 SHANK2-AS3Q9BTD1 123 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 TM2D2Q9BX73 214 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 MRPL32Q9BYC8 188 aaKnown RBP1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 PARD6GQ9BYG4 376 aaPredicted RBP1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 TMEM222Q9H0R3 208 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 Q9HAA7 133 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 DNAJC4Q9NNZ3 241 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 GSN-AS1Q9NRJ2 163 aa1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 PAIP2BQ9ULR5 123 aaKnown RBP1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 RCL1Q9Y2P8 373 aaKnown RBP1.57□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGKV1OR2-108A0A075B7D4 117 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 TRAV8-3A0A0A6YYJ7 113 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 TRAV8-6A0A0B4J262 113 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 A0A0B4J2A0 478 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 LOC100506127A0A0U1RQW1 187 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 C7orf71A4D174 169 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 RBFOX3A6NFN3 312 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SPINK4O60575 86 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 MPDU1O75352 247 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 HYPMO75409 117 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 APOA1P02647 267 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 CD3DP04234 171 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 IL5P05113 134 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SLC25A5P05141 298 aaKnown RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR5G3P0C626 314 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 MT1HL1P0DM35 61 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 CXCL2P19875 107 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 ANXA7P20073 488 aaKnown RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 TBPP20226 339 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 GATA2P23769 480 aaPredicted RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 PPT1P50897 306 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 CCR6P51684 374 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 AQP4P55087 323 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 TIRAPP58753 221 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 RPP30P78346 268 aaKnown RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 AKR1C1Q04828 323 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 FHL2Q14192 279 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 WFDC2Q14508 124 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SMCO1Q147U7 214 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SURF2Q15527 256 aaPredicted RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 ANXA2RQ3ZCQ2 193 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SCGB2B2Q4G0G5 96 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 LINC01620Q4KN68 170 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 C4orf46Q504U0 113 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 IBA57Q5T440 356 aaKnown RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 TMEM268Q5VZI3 342 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 TEPPQ6URK8 271 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 LCN15Q6UWW0 184 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 TMEM182Q6ZP80 229 aaPredicted RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 Q6ZRU5 148 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SNX29P2Q8IUI4 249 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 IQCF2Q8IXL9 164 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SELENOHQ8IZQ5 122 aaKnown RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 EIF4E3Q8N5X7 224 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 1797.5 ms