RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 INS-IGF2F8WCM5 200 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 K7EIM0 57 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 TGOLN2O43493 480 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 IGKV1-39P01597 117 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 IGKV1-5P01602 117 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 IGHV3-23P01764 117 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 HLA-AP01891 365 aaKnown RBP4.41□□□□□ -1.7
LSM5-203ENST00000409782 IGKV1D-39P04432 117 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 P0C879 139 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 STAG3L2P0CL84 134 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 AKAIN1P0CW23 69 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 FOLR2P14207 255 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 BCAP31P51572 246 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 AKR1C2P52895 323 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 SCGB2B2Q4G0G5 96 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 PLET1Q6UQ28 207 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 SBSPONQ8IVN8 264 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 OR10W1Q8NGF6 305 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 OR4C16Q8NGL9 310 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 MCFD2Q8NI22 146 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 RASL10AQ92737 203 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 DIRAS2Q96HU8 199 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 TP53RKQ96S44 253 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 KIR2DL4Q99706 377 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 PRRT1Q99946 306 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 ZNF436Q9C0F3 470 aaPredicted RBP4.41□□□□□ -1.7
LSM5-203ENST00000409782 NXF2Q9GZY0 626 aaKnown RBP4.41□□□□□ -1.7
LSM5-203ENST00000409782 MDFICQ9P1T7 246 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 C14orf166Q9Y224 244 aaKnown RBP4.41□□□□□ -1.7
LSM5-203ENST00000409782 UFC1Q9Y3C8 167 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 S4R3C0 116 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 DNAH7Q8WXX0 4024 aa4.41□□□□□ -1.7
LSM5-203ENST00000409782 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.7
LSM5-203ENST00000409782 ANKRD20A5PA0PJZ0 165 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 NDUFA4O00483 81 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 IGHV3-48P01763 117 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 CBLN1P23435 193 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 FAUP35544 74 aaKnown RBP4.4□□□□□ -1.71
LSM5-203ENST00000409782 AP3S2P59780 193 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 HSPE1P61604 102 aaKnown RBP4.4□□□□□ -1.71
LSM5-203ENST00000409782 ERHP84090 104 aaKnown RBP4.4□□□□□ -1.71
LSM5-203ENST00000409782 DEFB114Q30KQ6 69 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 UNQ9165/PRO28630Q6UXU0 137 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 ZNF546Q86UE3 836 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 TMEM61Q8N0U2 210 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 SLC35G3Q8N808 338 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 RNASE11Q8TAA1 199 aaKnown RBP4.4□□□□□ -1.71
LSM5-203ENST00000409782 TM2D3Q9BRN9 247 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 PDCD10Q9BUL8 212 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 NAA60Q9H7X0 242 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 DAZ1Q9NQZ3 744 aaKnown RBP4.4□□□□□ -1.71
LSM5-203ENST00000409782 SCP2D1Q9UJQ7 156 aa4.4□□□□□ -1.71
LSM5-203ENST00000409782 DYNC2H1Q8NCM8 4307 aaKnown RBP4.4□□□□□ -1.71
LSM5-203ENST00000409782 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 IZUMO1RA6ND01 250 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 FABP12A6NFH5 140 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 OR2T8A6NH00 312 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 CRYM-AS1A6NIL9 109 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 TEX46H3BTG2 121 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 I3L2K1 104 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 CORTO00230 105 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 NUPL2O15504 423 aaKnown RBP4.39□□□□□ -1.71
LSM5-203ENST00000409782 CDS2O95674 445 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 OR5AC1P0C628 307 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 C8orf88P0DMB2 117 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 Q56UQ5 140 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 SLC16A13Q7RTY0 426 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 POM121L12Q8N7R1 296 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 OR52E5Q8NH55 327 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 DEDD2Q8WXF8 326 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 CACNG8Q8WXS5 425 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 RBPMSQ93062 196 aaKnown RBP4.39□□□□□ -1.71
LSM5-203ENST00000409782 IL22RA2Q969J5 263 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 SCGB3A2Q96PL1 93 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 SOSTQ9BQB4 213 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 PAXXQ9BUH6 204 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 TMEM222Q9H0R3 208 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 Q9H3A6 140 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 MRPL27Q9P0M9 148 aaKnown RBP4.39□□□□□ -1.71
LSM5-203ENST00000409782 CACFD1Q9UGQ2 172 aa4.39□□□□□ -1.71
LSM5-203ENST00000409782 TRAV6A0A075B6T7 132 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 CCDC160A6NGH7 325 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 K7EMT4 169 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 SERF1AO75920 110 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 SNAPINO95295 136 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 MT-CO2P00403 227 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 IFNA17P01571 189 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 S100A5P33763 92 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 SNCAP37840 140 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.712e-7■■■■□ 24.9
LSM5-203ENST00000409782 GUCA2BQ16661 112 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 BSXQ3C1V8 233 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 SP6Q3SY56 376 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 Q6ZN92 141 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 C6orf223Q8N319 242 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 NKAPP1Q8N9T2 125 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 UBAC2Q8NBM4 344 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 LYPD6BQ8NI32 183 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 LHFPL5Q8TAF8 219 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 GALNT14Q96FL9 552 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms