RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 PSMB3P49720 205 aa12.39□□□□□ -0.43
SUMO1-208ENST00000409627 ZNF726P1Q15940 193 aa12.39□□□□□ -0.43
SUMO1-208ENST00000409627 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
SUMO1-208ENST00000409627 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
SUMO1-208ENST00000409627 ZNF503Q96F45 646 aa12.39□□□□□ -0.43
SUMO1-208ENST00000409627 MAP6D1Q9H9H5 199 aa12.39□□□□□ -0.43
SUMO1-208ENST00000409627 C19orf73Q9NVV2 129 aa12.39□□□□□ -0.43
SUMO1-208ENST00000409627 NOTCH1P46531 2555 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 ZNF253O75346 499 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 EIF3GO75821 320 aaKnown RBP eCLIP12.38□□□□□ -0.43
SUMO1-208ENST00000409627 RAB5CP51148 216 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 SNRPD3P62318 126 aaKnown RBP12.38□□□□□ -0.43
SUMO1-208ENST00000409627 SSX7Q7RTT5 188 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 RNF141Q8WVD5 230 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 FXYD5Q96DB9 178 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 SLC50A1Q9BRV3 221 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 ZNF586Q9NXT0 402 aa12.38□□□□□ -0.43
SUMO1-208ENST00000409627 TRBV19A0A075B6N1 114 aa12.37□□□□□ -0.43
SUMO1-208ENST00000409627 OR11H12B2RN74 326 aa12.37□□□□□ -0.43
SUMO1-208ENST00000409627 HMGB3O15347 200 aaKnown RBP12.37□□□□□ -0.43
SUMO1-208ENST00000409627 PRB2P02812 416 aaPredicted RBP12.37□□□□□ -0.43
SUMO1-208ENST00000409627 OR10J4P0C629 311 aa12.37□□□□□ -0.43
SUMO1-208ENST00000409627 ZNF688P0C7X2 276 aa12.37□□□□□ -0.43
SUMO1-208ENST00000409627 ARL14EPLP0DKL9 152 aa12.37□□□□□ -0.43
SUMO1-208ENST00000409627 SULT1A2P50226 295 aa12.37□□□□□ -0.43
SUMO1-208ENST00000409627 UBE2L3P68036 154 aaKnown RBP12.37□□□□□ -0.43
SUMO1-208ENST00000409627 PDE6HQ13956 83 aa12.37□□□□□ -0.43
SUMO1-208ENST00000409627 SAT2Q96F10 170 aaPredicted RBP12.37□□□□□ -0.43
SUMO1-208ENST00000409627 ZNF331Q9NQX6 463 aaPredicted RBP12.37□□□□□ -0.43
SUMO1-208ENST00000409627 UBQLN2Q9UHD9 624 aa12.37□□□□□ -0.43
SUMO1-208ENST00000409627 TRAV8-2A0A0B4J237 113 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 K7EIL1 84 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 SLC17A3O00476 420 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 CXorf1O96002 111 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 SNRPCP09234 159 aaKnown RBP12.36□□□□□ -0.43
SUMO1-208ENST00000409627 NBEAP1P0C6P0 100 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 FHITP49789 147 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 DEFB131AP59861 70 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 FAM213BQ8TBF2 198 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 LRRC20Q8TCA0 184 aa12.36□□□□□ -0.43
SUMO1-208ENST00000409627 MAP1LC3B2A6NCE7 125 aa12.35□□□□□ -0.43
SUMO1-208ENST00000409627 H3BTX0 84 aa12.35□□□□□ -0.43
SUMO1-208ENST00000409627 PSMG4Q5JS54 123 aa12.35□□□□□ -0.43
SUMO1-208ENST00000409627 BLNKQ8WV28 456 aa12.35□□□□□ -0.43
SUMO1-208ENST00000409627 MAP1LC3BQ9GZQ8 125 aa12.35□□□□□ -0.43
SUMO1-208ENST00000409627 WFDC10AQ9H1F0 79 aa12.35□□□□□ -0.43
SUMO1-208ENST00000409627 CLEC5AQ9NY25 188 aa12.35□□□□□ -0.43
SUMO1-208ENST00000409627 NDUFB4O95168 129 aa12.34□□□□□ -0.43
SUMO1-208ENST00000409627 GCHFRP30047 84 aa12.34□□□□□ -0.43
SUMO1-208ENST00000409627 PSG9Q00887 426 aa12.34□□□□□ -0.43
SUMO1-208ENST00000409627 SUN5Q8TC36 379 aa12.34□□□□□ -0.43
SUMO1-208ENST00000409627 MBD3L1Q8WWY6 194 aa12.34□□□□□ -0.43
SUMO1-208ENST00000409627 C20orf173Q96LM9 149 aa12.34□□□□□ -0.43
SUMO1-208ENST00000409627 LINC00052Q96N35 136 aa12.34□□□□□ -0.43
SUMO1-208ENST00000409627 A8MZ25 164 aa12.33□□□□□ -0.44
SUMO1-208ENST00000409627 ALKAL2Q6UX46 152 aa12.33□□□□□ -0.44
SUMO1-208ENST00000409627 APRG1Q8IVJ8 170 aa12.33□□□□□ -0.44
SUMO1-208ENST00000409627 DEFB125Q8N687 156 aa12.33□□□□□ -0.44
SUMO1-208ENST00000409627 TMEM167BQ9NRX6 74 aa12.33□□□□□ -0.44
SUMO1-208ENST00000409627 H2AFB1P0C5Y9 115 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 IGHV4-30-4P0DP06 118 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 FGF8P55075 233 aaPredicted RBP12.32□□□□□ -0.44
SUMO1-208ENST00000409627 DEFA6Q01524 100 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 PSG3Q16557 428 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 FAM74A1Q5RGS3 127 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 IGFL4Q6B9Z1 124 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 LYPD1Q8N2G4 141 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 RNF182Q8N6D2 247 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 CITED4Q96RK1 184 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 SRD5A3Q9H8P0 318 aa12.32□□□□□ -0.44
SUMO1-208ENST00000409627 HLA-DMBP28068 263 aa12.31□□□□□ -0.44
SUMO1-208ENST00000409627 ZNF124Q15973 351 aa12.31□□□□□ -0.44
SUMO1-208ENST00000409627 ZNF738Q8NE65 137 aa12.31□□□□□ -0.44
SUMO1-208ENST00000409627 SFT2D1Q8WV19 159 aa12.31□□□□□ -0.44
SUMO1-208ENST00000409627 MRPL53Q96EL3 112 aaKnown RBP12.31□□□□□ -0.44
SUMO1-208ENST00000409627 AAMDCQ9H7C9 122 aa12.31□□□□□ -0.44
SUMO1-208ENST00000409627 PRELID1Q9Y255 219 aa12.31□□□□□ -0.44
SUMO1-208ENST00000409627 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
SUMO1-208ENST00000409627 IQCF2Q8IXL9 164 aa12.3□□□□□ -0.44
SUMO1-208ENST00000409627 EXOC3-AS1Q8N2X6 119 aa12.3□□□□□ -0.44
SUMO1-208ENST00000409627 MRAPQ8TCY5 172 aa12.3□□□□□ -0.44
SUMO1-208ENST00000409627 Q9H3A6 140 aa12.3□□□□□ -0.44
SUMO1-208ENST00000409627 SAV1Q9H4B6 383 aaPredicted RBP12.3□□□□□ -0.44
SUMO1-208ENST00000409627 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
SUMO1-208ENST00000409627 TRAV1-1A0A0B4J248 108 aa12.29□□□□□ -0.44
SUMO1-208ENST00000409627 ZNF705EA8MWA4 302 aaPredicted RBP12.29□□□□□ -0.44
SUMO1-208ENST00000409627 RANP62826 216 aaKnown RBP12.29□□□□□ -0.44
SUMO1-208ENST00000409627 TEX261Q6UWH6 196 aa12.29□□□□□ -0.44
SUMO1-208ENST00000409627 TMPRSS5Q9H3S3 457 aa12.29□□□□□ -0.44
SUMO1-208ENST00000409627 A0A0J9YX75 114 aa12.28□□□□□ -0.44
SUMO1-208ENST00000409627 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
SUMO1-208ENST00000409627 TEX46H3BTG2 121 aa12.28□□□□□ -0.44
SUMO1-208ENST00000409627 HLA-DRB4P13762 266 aa12.28□□□□□ -0.44
SUMO1-208ENST00000409627 ICAM4Q14773 271 aa12.28□□□□□ -0.44
SUMO1-208ENST00000409627 ACTL10Q5JWF8 245 aa12.28□□□□□ -0.44
SUMO1-208ENST00000409627 EBLN2Q6P2I7 272 aa12.28□□□□□ -0.44
SUMO1-208ENST00000409627 RPUSD4Q96CM3 377 aaKnown RBP12.28□□□□□ -0.44
SUMO1-208ENST00000409627 OTORQ9NRC9 128 aa12.28□□□□□ -0.44
SUMO1-208ENST00000409627 HLA-DRB4X5D2U9 266 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms