RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 TPSG1Q9NRR2 321 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 ZNF580Q9UK33 172 aa9.71□□□□□ -0.86
CHRNA1-205ENST00000409542 TRBV20OR9-2A0A075B6H5 130 aa9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 CRYGBP07316 175 aa9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 IGHV4-30-4P0DP06 118 aa9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 COA6Q5JTJ3 125 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 ACTL10Q5JWF8 245 aa9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 MMD2Q8IY49 270 aa9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 ZNF114Q8NC26 417 aa9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 ARPC1AQ92747 370 aa9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 C19orf73Q9NVV2 129 aa9.7□□□□□ -0.86
CHRNA1-205ENST00000409542 ALMS1Q8TCU4 4167 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 TRAV9-1A0A075B6T8 112 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 IGHV4OR15-8A0A075B7B6 117 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 A0A087WW49 117 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 IGHV7-81A0A0B4J1V7 117 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 A0A1W2PPQ1 181 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 E7EUB6 86 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 SLC25A17O43808 307 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 ACTL6BO94805 426 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 C8orf88P0DMB2 117 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 SELENOTP62341 195 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 PSG5Q15238 335 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 PRSS8Q16651 343 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 MLANAQ16655 118 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 C10orf55Q5SWW7 151 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 DNLZQ5SXM8 178 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 OR1L4Q8NGR5 311 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 ZNF503Q96F45 646 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 ACY3Q96HD9 319 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 PFDN5Q99471 154 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 OR51M1Q9H341 326 aa9.69□□□□□ -0.86
CHRNA1-205ENST00000409542 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 LINC01619G3V211 115 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 CRYGCP07315 174 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 ETFRF1Q6IPR1 90 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 OR5T1Q8NG75 326 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 OR10G8Q8NGN5 311 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 OCC1Q8TAD7 63 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 RNF5Q99942 180 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 FNDC4Q9H6D8 234 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 DNAJC4Q9NNZ3 241 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 NIT2Q9NQR4 276 aa9.68□□□□□ -0.86
CHRNA1-205ENST00000409542 TRAV41A0A0B4J266 112 aa9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 IGLC7A0M8Q6 106 aa9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 RPL27AP46776 148 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 NDPQ00604 133 aa9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 MMDQ15546 238 aa9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 C19orf54Q5BKX5 351 aa9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 TMEM183AQ8IXX5 376 aa9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 TMEM37Q8WXS4 190 aa9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 FAM167A-AS1Q96KT0 104 aa9.67□□□□□ -0.86
CHRNA1-205ENST00000409542 IGKV1D-37A0A075B6S9 117 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 PGPEP1LA6NFU8 196 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 OR7C2O60412 319 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 GATA2P23769 480 aaPredicted RBP9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 GFI1BQ5VTD9 330 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 OR1P1Q8NH06 330 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 NPIPB3Q92617 1050 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 SLC25A2Q9BXI2 301 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 FRAS1Q86XX4 4008 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 A8MZ25 164 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 CORTO00230 105 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 COX7A2P2O60397 106 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 IGHV3-11P01762 117 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 HLA-DRB1P01911 266 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 FABP1P07148 127 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 OR10J4P0C629 311 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 TRGV9Q99603 122 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 SRSF8Q9BRL6 282 aaKnown RBP9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 GSN-AS1Q9NRJ2 163 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 IL36BQ9NZH7 164 aa9.66□□□□□ -0.86
CHRNA1-205ENST00000409542 TNCP24821 2201 aa9.65□□□□□ -0.86
CHRNA1-205ENST00000409542 HELTA6NFD8 242 aa9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 GGTLC3B5MD39 225 aa9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 K7EN84 100 aa9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 LGALS1P09382 135 aaKnown RBP9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 EGR2P11161 476 aaPredicted RBP9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 SSBP2P81877 361 aaPredicted RBP9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 ECSCRQ19T08 205 aa9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 PYY3Q5JQD4 70 aa9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 C10orf113Q5VZT2 155 aa9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 HERC2O95714 4834 aa9.65□□□□□ -0.87
CHRNA1-205ENST00000409542 ZNF320A2RRD8 509 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 XKRY2A2RUG3 117 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 CRYBB3P26998 211 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 GNG4P50150 75 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 YPEL3P61236 119 aaPredicted RBP9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 UBE2L3P68036 154 aaKnown RBP9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 CTAG1AP78358 180 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 TNXAQ16473 311 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 C5orf64Q2M2E5 130 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 PATE2Q6UY27 113 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 HIST1H2BLQ99880 126 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 RETNQ9HD89 108 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 ZNF355PQ9NSJ1 428 aa9.64□□□□□ -0.87
CHRNA1-205ENST00000409542 TEX22C9J3V5 150 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms