RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 IGLC2P0DOY2 106 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 UBE2L3P68036 154 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 LCN15Q6UWW0 184 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 MBD3L1Q8WWY6 194 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 MS4A6AQ9H2W1 248 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 UBQLN2Q9UHD9 624 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 SELENOKQ9Y6D0 94 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 HBE1P02100 147 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 PYYP10082 97 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 PDE6HQ13956 83 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 GUCA2BQ16661 112 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 SSX7Q7RTT5 188 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 GBGT1Q8N5D6 347 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 SFT2D1Q8WV19 159 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 TMEM167BQ9NRX6 74 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 SMAD5-AS1Q9Y6J3 95 aa12.39□□□□□ -0.43
TSPAN4-208ENST00000409531 IZUMO1RA6ND01 250 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 ZNF253O75346 499 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 OR10J4P0C629 311 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 NBEAP1P0C6P0 100 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 GCHFRP30047 84 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 FXYD5Q96DB9 178 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 ZNF503Q96F45 646 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 SLC50A1Q9BRV3 221 aa12.38□□□□□ -0.43
TSPAN4-208ENST00000409531 TRAV1-1A0A0B4J248 108 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 ID1P41134 155 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 TFPI2P48307 235 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 SNRPD3P62318 126 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 WFDC3Q8IUB2 231 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 IQCF2Q8IXL9 164 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 DCANP1Q8TF63 244 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 BLNKQ8WV28 456 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 ZNF586Q9NXT0 402 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 ZNF256Q9Y2P7 627 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 TRBV19A0A075B6N1 114 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 H3BQ15 152 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 K7EQG2 157 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 ISLRO14498 428 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 PSMB3P49720 205 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 FGF8P55075 233 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 PSG9Q00887 426 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 ZNF767PQ75MW2 155 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 C16orf92Q96LL3 132 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 CLEC5AQ9NY25 188 aa12.37□□□□□ -0.43
TSPAN4-208ENST00000409531 DNAH3Q8TD57 4116 aa12.36□□□□□ -0.43
TSPAN4-208ENST00000409531 PPT1P50897 306 aa12.36□□□□□ -0.43
TSPAN4-208ENST00000409531 LYPD1Q8N2G4 141 aa12.36□□□□□ -0.43
TSPAN4-208ENST00000409531 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
TSPAN4-208ENST00000409531 PRR25Q96S07 402 aa12.36□□□□□ -0.43
TSPAN4-208ENST00000409531 SOCS3O14543 225 aa12.35□□□□□ -0.43
TSPAN4-208ENST00000409531 SNRPCP09234 159 aaKnown RBP12.35□□□□□ -0.43
TSPAN4-208ENST00000409531 GTSCR1Q86UQ5 136 aa12.35□□□□□ -0.43
TSPAN4-208ENST00000409531 C17orf77Q96MU5 243 aa12.35□□□□□ -0.43
TSPAN4-208ENST00000409531 AAMDCQ9H7C9 122 aa12.35□□□□□ -0.43
TSPAN4-208ENST00000409531 ZNF331Q9NQX6 463 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-208ENST00000409531 H3BTX0 84 aa12.34□□□□□ -0.43
TSPAN4-208ENST00000409531 RAB14P61106 215 aa12.34□□□□□ -0.43
TSPAN4-208ENST00000409531 FAM110AQ9BQ89 295 aa12.34□□□□□ -0.43
TSPAN4-208ENST00000409531 A0A1B0GV50 99 aa12.33□□□□□ -0.44
TSPAN4-208ENST00000409531 SLC17A3O00476 420 aa12.33□□□□□ -0.44
TSPAN4-208ENST00000409531 NDUFB4O95168 129 aa12.33□□□□□ -0.44
TSPAN4-208ENST00000409531 IFITM2Q01629 132 aa12.33□□□□□ -0.44
TSPAN4-208ENST00000409531 NKX6-2Q9C056 277 aaPredicted RBP12.33□□□□□ -0.44
TSPAN4-208ENST00000409531 TMPRSS5Q9H3S3 457 aa12.33□□□□□ -0.44
TSPAN4-208ENST00000409531 PRELID1Q9Y255 219 aa12.33□□□□□ -0.44
TSPAN4-208ENST00000409531 ARL2-SNX15V9GYD0 113 aa12.33□□□□□ -0.44
TSPAN4-208ENST00000409531 A0A1W2PRE2 83 aa12.32□□□□□ -0.44
TSPAN4-208ENST00000409531 IFNA1P01562 189 aa12.32□□□□□ -0.44
TSPAN4-208ENST00000409531 ZNF688P0C7X2 276 aa12.32□□□□□ -0.44
TSPAN4-208ENST00000409531 CD81P60033 236 aa12.32□□□□□ -0.44
TSPAN4-208ENST00000409531 RANP62826 216 aaKnown RBP12.32□□□□□ -0.44
TSPAN4-208ENST00000409531 LYPD6BQ8NI32 183 aa12.32□□□□□ -0.44
TSPAN4-208ENST00000409531 MANBALQ9NQG1 85 aa12.32□□□□□ -0.44
TSPAN4-208ENST00000409531 OR11H12B2RN74 326 aa12.31□□□□□ -0.44
TSPAN4-208ENST00000409531 PMS2P11Q13670 270 aa12.31□□□□□ -0.44
TSPAN4-208ENST00000409531 PSG3Q16557 428 aa12.31□□□□□ -0.44
TSPAN4-208ENST00000409531 PSMG4Q5JS54 123 aa12.31□□□□□ -0.44
TSPAN4-208ENST00000409531 MRPL53Q96EL3 112 aaKnown RBP12.31□□□□□ -0.44
TSPAN4-208ENST00000409531 LINC00052Q96N35 136 aa12.31□□□□□ -0.44
TSPAN4-208ENST00000409531 Q9H3A6 140 aa12.31□□□□□ -0.44
TSPAN4-208ENST00000409531 OTORQ9NRC9 128 aa12.31□□□□□ -0.44
TSPAN4-208ENST00000409531 TRAV8-2A0A0B4J237 113 aa12.3□□□□□ -0.44
TSPAN4-208ENST00000409531 TAGLN2P37802 199 aaKnown RBP12.3□□□□□ -0.44
TSPAN4-208ENST00000409531 ICAM4Q14773 271 aa12.3□□□□□ -0.44
TSPAN4-208ENST00000409531 FAM24BQ8N5W8 94 aa12.3□□□□□ -0.44
TSPAN4-208ENST00000409531 MAP6D1Q9H9H5 199 aa12.3□□□□□ -0.44
TSPAN4-208ENST00000409531 NMBP08949 121 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 CD7P09564 240 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 CSN1S1P47710 185 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 DEFB131AP59861 70 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 UBE2G2P60604 165 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 CCL20P78556 96 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 ODF3L2Q3SX64 289 aa12.29□□□□□ -0.44
TSPAN4-208ENST00000409531 IGFL4Q6B9Z1 124 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms