RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 HIST2H2BDQ6DRA6 164 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 C16orf54Q6UWD8 224 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 GPHB5Q86YW7 130 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 LYPD1Q8N2G4 141 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 IGF2BP2-AS1Q96M15 143 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 JMJD8Q96S16 334 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 ATG101Q9BSB4 218 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 HIVEP1P15822 2718 aa10.74□□□□□ -0.69
GPNMB-203ENST00000409458 A0A087WWC5 75 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 TCRAP04437 139 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 EDN2P20800 178 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 GALR1P47211 349 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 CNN1P51911 297 aaKnown RBP10.73□□□□□ -0.69
GPNMB-203ENST00000409458 TM4SF20Q53R12 229 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 LINC01006Q8NI28 216 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 GLMPQ8WWB7 406 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 DAZ1Q9NQZ3 744 aaKnown RBP10.73□□□□□ -0.69
GPNMB-203ENST00000409458 SMCO4Q9NRQ5 59 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 K7EN84 100 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 ISLRO14498 428 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 PRB4P10163 310 aaPredicted RBP10.73□□□□□ -0.69
GPNMB-203ENST00000409458 GNG4P50150 75 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 DEFB136Q30KP8 78 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 RNF212Q495C1 297 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 FAM106AQ4KMX7 169 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 KHDC1LQ5JSQ8 128 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 OCC1Q8TAD7 63 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 CMTM2Q8TAZ6 248 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 ISOC2Q96AB3 205 aa10.73□□□□□ -0.69
GPNMB-203ENST00000409458 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 ZNF785A8K8V0 405 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 M0R3E3 92 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 TSPAN4O14817 238 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 ZNF253O75346 499 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 CDX1P47902 265 aaPredicted RBP10.72□□□□□ -0.69
GPNMB-203ENST00000409458 TAS2R60P59551 318 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 PSG9Q00887 426 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 C4orf3Q8WVX3 66 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 SGK494Q96LW2 274 aa10.72□□□□□ -0.69
GPNMB-203ENST00000409458 NDUFA7O95182 113 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 IGLV2-8P01709 118 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 HLA-DMBP28068 263 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
GPNMB-203ENST00000409458 SRSF2Q01130 221 aaKnown RBP10.71□□□□□ -0.69
GPNMB-203ENST00000409458 TMEM183BQ1AE95 376 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 IGFL4Q6B9Z1 124 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 GOLT1AQ6ZVE7 132 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 REC114Q7Z4M0 266 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 AAMDCQ9H7C9 122 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 ZNF331Q9NQX6 463 aaPredicted RBP10.71□□□□□ -0.69
GPNMB-203ENST00000409458 LY96Q9Y6Y9 160 aa10.71□□□□□ -0.69
GPNMB-203ENST00000409458 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 K7EMT4 169 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 TCF21O43680 179 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 CD28P10747 220 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 SYNJ2BPP57105 145 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 KLHL30-AS1Q8NEE0 82 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 FMC1Q96HJ9 113 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 UFC1Q9Y3C8 167 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
GPNMB-203ENST00000409458 FLNBO75369 2602 aaKnown RBP10.7□□□□□ -0.7
GPNMB-203ENST00000409458 NSD1Q96L73 2696 aaPredicted RBP10.7□□□□□ -0.7
GPNMB-203ENST00000409458 TRAV8-1A0A0A6YYK1 113 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 A0A1W2PS18 150 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 CHEK1O14757 476 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 CRLF1O75462 422 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 UBE2G1P62253 170 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 C11orf44Q8N8P7 122 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 SMPXQ9UHP9 88 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 NF1P21359 2839 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 CYSRT1A8MQ03 144 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 A8MWP6 167 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 DIRC3C9JPN6 131 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 IGLV2-11P01706 119 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 MT-ND4LP03901 98 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 SLURP1P55000 103 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 OR5I1Q13606 314 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 C8orf86Q6ZUL3 223 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 Q86TA4 180 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 C1QL4Q86Z23 238 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 YPEL4Q96NS1 127 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 DUX3Q96PT4 197 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 SLC50A1Q9BRV3 221 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 TUBA4BQ9H853 241 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 SELENOKQ9Y6D0 94 aa10.69□□□□□ -0.7
GPNMB-203ENST00000409458 FN1P02751 2386 aaKnown RBP10.69□□□□□ -0.7
GPNMB-203ENST00000409458 BAHCC1Q9P281 2608 aa10.68□□□□□ -0.7
GPNMB-203ENST00000409458 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
GPNMB-203ENST00000409458 LINC01619G3V211 115 aa10.68□□□□□ -0.7
GPNMB-203ENST00000409458 LGALS9O00182 355 aa10.68□□□□□ -0.7
GPNMB-203ENST00000409458 BAGE2Q86Y30 109 aa10.68□□□□□ -0.7
GPNMB-203ENST00000409458 RNF182Q8N6D2 247 aa10.68□□□□□ -0.7
GPNMB-203ENST00000409458 OR11H1Q8NG94 326 aa10.68□□□□□ -0.7
GPNMB-203ENST00000409458 ANAPC16Q96DE5 110 aa10.68□□□□□ -0.7
GPNMB-203ENST00000409458 SFRP2Q96HF1 295 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms