RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 Q5VSD8 79 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 TMEM252Q8N6L7 170 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 LINC00052Q96N35 136 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 C18orf15Q96N68 181 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 METTL26Q96S19 204 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 IGSF23A1L1A6 192 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 FAM24AA6NFZ4 105 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 WRBO00258 174 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 SSSCA1O60232 199 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 TMEM50AO95807 157 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 LPAR6P43657 344 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 NPBWR1P48145 328 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 PAX9P55771 341 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 TAS2R30P59541 319 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 NHLH2Q02577 135 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 SMIM3Q9BZL3 60 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 FKBP11Q9NYL4 201 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 CACNG5Q9UF02 275 aa9.02□□□□□ -0.96
CHRNA1-203ENST00000409219 HLA-DRB4P13762 266 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 RAB5CP51148 216 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 CAV2P51636 162 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 AKR1C2P52895 323 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 ZNF266Q14584 549 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 LYPD1Q8N2G4 141 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 LYPD6BQ8NI32 183 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 RNASE11Q8TAA1 199 aaKnown RBP9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 MAGT1Q9H0U3 335 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 YTHDF2Q9Y5A9 579 aaKnown RBP9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.97
CHRNA1-203ENST00000409219 SYNGR2O43760 224 aa9.01□□□□□ -0.97
CHRNA1-203ENST00000409219 FXYD7P58549 80 aa9.01□□□□□ -0.97
CHRNA1-203ENST00000409219 DAD1P61803 113 aa9.01□□□□□ -0.97
CHRNA1-203ENST00000409219 PRCDQ00LT1 54 aa9.01□□□□□ -0.97
CHRNA1-203ENST00000409219 PXDC1Q5TGL8 231 aa9.01□□□□□ -0.97
CHRNA1-203ENST00000409219 GLMPQ8WWB7 406 aa9.01□□□□□ -0.97
CHRNA1-203ENST00000409219 MED6O75586 246 aa9□□□□□ -0.97
CHRNA1-203ENST00000409219 BTF3P20290 206 aaKnown RBP9□□□□□ -0.97
CHRNA1-203ENST00000409219 M6PRP20645 277 aa9□□□□□ -0.97
CHRNA1-203ENST00000409219 SULT1A1P50225 295 aa9□□□□□ -0.97
CHRNA1-203ENST00000409219 XGP55808 180 aa9□□□□□ -0.97
CHRNA1-203ENST00000409219 SNRPD3P62318 126 aaKnown RBP9□□□□□ -0.97
CHRNA1-203ENST00000409219 GDF5OSQ5U4N7 250 aa9□□□□□ -0.97
CHRNA1-203ENST00000409219 NARS2Q96I59 477 aaKnown RBP9□□□□□ -0.97
CHRNA1-203ENST00000409219 MRPL36Q9P0J6 103 aaKnown RBP9□□□□□ -0.97
CHRNA1-203ENST00000409219 STRAPQ9Y3F4 350 aaKnown RBP9□□□□□ -0.97
CHRNA1-203ENST00000409219 LINC00588Q9Y4M8 146 aa9□□□□□ -0.97
CHRNA1-203ENST00000409219 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
CHRNA1-203ENST00000409219 LOC102723971A0A1B0GUV8 181 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 IGKV3-20P01619 116 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 DEFB1P60022 68 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 C16orf54Q6UWD8 224 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 STX12Q86Y82 276 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 ZNF709Q8N972 641 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 BPIFCQ8NFQ6 507 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 OR5C1Q8NGR4 320 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 FRZBQ92765 325 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 HSPB7Q9UBY9 170 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 U3KQE9 123 aa8.99□□□□□ -0.97
CHRNA1-203ENST00000409219 TMEM218A2RU14 115 aa8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 UMAD1C9J7I0 102 aa8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 IZUMO4Q1ZYL8 232 aa8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 AARDQ4LEZ3 155 aa8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 SPINK9Q5DT21 86 aa8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 GNPNAT1Q96EK6 184 aaPredicted RBP8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 ATP5SQ99766 215 aa8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 CACFD1Q9UGQ2 172 aa8.98□□□□□ -0.97
CHRNA1-203ENST00000409219 CLN5O75503 358 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 NUDT3O95989 172 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 HBE1P02100 147 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 CCL18P55774 89 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 ERHP84090 104 aaKnown RBP8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 CLINT1Q14677 625 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 C10orf91Q5T1B1 145 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 Q6ZRG5 221 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 C1orf158Q8N1D5 194 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 HSD17B11Q8NBQ5 300 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 FNDC4Q9H6D8 234 aaPredicted RBP8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 SEPSECSQ9HD40 501 aaKnown RBP8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 NRN1Q9NPD7 142 aa8.97□□□□□ -0.97
CHRNA1-203ENST00000409219 CST7O76096 145 aa8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 NXPH3O95157 252 aa8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 IGKV1-17P01599 117 aa8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 ATP6V0CP27449 155 aa8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 HSPE1P61604 102 aaKnown RBP8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 OR4A16Q8NH70 328 aa8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 PARD6GQ9BYG4 376 aaPredicted RBP8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 SLC35B3Q9H1N7 401 aa8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 PSENENQ9NZ42 101 aa8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 CARHSP1Q9Y2V2 147 aaKnown RBP8.96□□□□□ -0.97
CHRNA1-203ENST00000409219 FUSP35637 526 aaKnown RBP eCLIP8.96□□□□□ -0.98
CHRNA1-203ENST00000409219 HBG1P69891 147 aa8.96□□□□□ -0.98
CHRNA1-203ENST00000409219 HBG2P69892 147 aa8.96□□□□□ -0.98
CHRNA1-203ENST00000409219 RRN3P1Q2M238 152 aa8.96□□□□□ -0.98
CHRNA1-203ENST00000409219 TIGITQ495A1 244 aa8.96□□□□□ -0.98
CHRNA1-203ENST00000409219 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
CHRNA1-203ENST00000409219 TMEM14EPQ6UXP3 125 aa8.96□□□□□ -0.98
CHRNA1-203ENST00000409219 H2BFWTQ7Z2G1 175 aa8.96□□□□□ -0.98
CHRNA1-203ENST00000409219 OR2G3Q8NGZ4 309 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms