RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PAX4O43316 350 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF25P17030 456 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 CDKN1BP46527 198 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 IGF2BP2-AS1Q96M15 143 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 PAM16Q9Y3D7 125 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 C15orf65H3BRN8 121 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 VCYO14598 125 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LHBP01229 141 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SCGB1A1P11684 91 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SSBP2P81877 361 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV3-16A0A0C4DH30 117 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 F8WEM9 126 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LAGE3Q14657 143 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SPRNQ5BIV9 151 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LHFPL1Q86WI0 220 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 VPS25Q9BRG1 176 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 OSTCQ9NRP0 149 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 F8W735 103 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 CCL18P55774 89 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 TRPT1Q86TN4 253 aaKnown RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 TSKUQ8WUA8 353 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 C1orf159Q96HA4 380 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 WFDC1Q9HC57 220 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 CCDC88CQ9P219 2028 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SRP19P09132 144 aaKnown RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 STAG3L3P0CL85 134 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SEC11AP67812 179 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 C6orf226Q5I0X4 101 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LYZL1Q6UWQ5 148 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 RPP25LQ8N5L8 163 aaKnown RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 C14orf178Q8N769 122 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LIME1Q9H400 295 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 VSIRQ9H7M9 311 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 TPSG1Q9NRR2 321 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 CNTRLQ7Z7A1 2325 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 HELZP42694 1942 aaKnown RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 TRAV12-2A0A075B6T6 113 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 A8MWV9 139 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 MMP23AO75900 390 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 Q5BKY6 102 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM14EPQ6UXP3 125 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SPAG8Q99932 426 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 RNF126Q9BV68 326 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 NMBP08949 121 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 MLANAQ16655 118 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 ATP6V0BQ99437 205 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 ZDBF2Q9HCK1 2354 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 C15orf62A8K5M9 175 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CD300CQ08708 224 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 NPBQ8NG41 125 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SDHCQ99643 169 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SSBP4Q9BWG4 385 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 JPT2Q9H910 190 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CABIN1Q9Y6J0 2220 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 A0A096LPF7 62 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 A0A0J9YY99 117 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SPART-AS1P0CW21 52 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 INSL3P51460 131 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SLC25A34Q6PIV7 304 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM75Q8N9X5 138 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SMPXQ9UHP9 88 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM256Q8N2U0 113 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 THAP8Q8NA92 274 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CITED2Q99967 270 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SPXQ9BT56 116 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 MS4A6AQ9H2W1 248 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV3-64A0A075B6Q5 118 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 TRAV13-1A0A0B4J241 112 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 GGTLC3B5MD39 225 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 H3BRN7 92 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 HBDP02042 147 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 RPL24P83731 157 aaKnown RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 BCL6BQ8N143 479 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 DEFB104AQ8WTQ1 72 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF524Q96C55 264 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CD300EQ496F6 205 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-203ENST00000409101 ATP5L2Q7Z4Y8 100 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 IMMP2LQ96T52 175 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 NOP10Q9NPE3 64 aaKnown RBP3.97□□□□□ -1.77
SCN3A-203ENST00000409101 IGKV1-6A0A0C4DH72 117 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 FABP2P12104 132 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 ICOSQ9Y6W8 199 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 PTPRDP23468 1912 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 IGKV2D-24A0A075B6R9 120 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV4OR15-8A0A075B7B6 117 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 A0A087WW49 117 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM89A2RUT3 159 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF134P52741 427 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 RPL23P62829 140 aaKnown RBP3.97□□□□□ -1.77
SCN3A-203ENST00000409101 BLCAPP62952 87 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 Q86TA4 180 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 APRG1Q8IVJ8 170 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 NKAPP1Q8N9T2 125 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 C16orf74Q96GX8 76 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 RALGAPA1Q6GYQ0 2036 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 RNF222A6NCQ9 220 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 PFN1P07737 140 aaKnown RBP3.97□□□□□ -1.77
SCN3A-203ENST00000409101 C11orf53Q8IXP5 236 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 C5orf56Q8N8D9 126 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms