RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 MRPL51Q4U2R6 128 aaKnown RBP10.17□□□□□ -0.78
HERC3-203ENST00000407637 MBNL2Q5VZF2 373 aaKnown RBP10.17□□□□□ -0.78
HERC3-203ENST00000407637 FAM104BQ5XKR9 115 aa10.17□□□□□ -0.78
HERC3-203ENST00000407637 E7EUB6 86 aa10.17□□□□□ -0.78
HERC3-203ENST00000407637 PRDX2P32119 198 aa10.17□□□□□ -0.78
HERC3-203ENST00000407637 DIAPH2-AS1Q14236 149 aa10.17□□□□□ -0.78
HERC3-203ENST00000407637 MORN3Q6PF18 240 aaPredicted RBP10.17□□□□□ -0.78
HERC3-203ENST00000407637 SFTA2Q6UW10 78 aa10.17□□□□□ -0.78
HERC3-203ENST00000407637 ZNF493Q6ZR52 646 aa10.17□□□□□ -0.78
HERC3-203ENST00000407637 EXOC3-AS1Q8N2X6 119 aa10.17□□□□□ -0.78
HERC3-203ENST00000407637 TEX29Q8N6K0 151 aa10.17□□□□□ -0.78
HERC3-203ENST00000407637 ABCA1O95477 2261 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 PRSS1P07477 247 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 RUSC1-AS1Q66K80 236 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 FOXC2Q99958 501 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 CALYQ9NYX4 217 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 CEP290O15078 2479 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 TMSB15BA0A087X1C1 80 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 CCDC179H3BU77 68 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 EVI2AP22794 236 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 ATP5IP56385 69 aaPredicted RBP10.16□□□□□ -0.78
HERC3-203ENST00000407637 MOGAT3Q86VF5 341 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 C8orf46Q8TAG6 207 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 HIF1ANQ9NWT6 349 aa10.16□□□□□ -0.78
HERC3-203ENST00000407637 IGHV5-10-1A0A0J9YXX1 117 aa10.15□□□□□ -0.78
HERC3-203ENST00000407637 SHISA9B4DS77 424 aa10.15□□□□□ -0.78
HERC3-203ENST00000407637 CLEC3BP05452 202 aa10.15□□□□□ -0.78
HERC3-203ENST00000407637 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
HERC3-203ENST00000407637 ERHP84090 104 aaKnown RBP10.15□□□□□ -0.79
HERC3-203ENST00000407637 TAL2Q16559 108 aa10.15□□□□□ -0.79
HERC3-203ENST00000407637 LYZL1Q6UWQ5 148 aa10.15□□□□□ -0.79
HERC3-203ENST00000407637 THAP8Q8NA92 274 aa10.15□□□□□ -0.79
HERC3-203ENST00000407637 KLF14Q8TD94 323 aaPredicted RBP10.15□□□□□ -0.79
HERC3-203ENST00000407637 PPDPFLQ8WWR9 84 aa10.15□□□□□ -0.79
HERC3-203ENST00000407637 CXXC4Q9H2H0 198 aa10.15□□□□□ -0.79
HERC3-203ENST00000407637 ZNRD1Q9P1U0 126 aa10.15□□□□□ -0.79
HERC3-203ENST00000407637 IGKV1D-17A0A075B6S4 117 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 IGHV3OR15-7A0A075B7D8 119 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 A0A1W2PQM1 296 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 TMEM8BA6NDV4 472 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 DPM2O94777 84 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 CKS2P33552 79 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 PSMB2P49721 201 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 ZNRF1Q8ND25 227 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 NDUFA4L2Q9NRX3 87 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 TMEM160Q9NX00 188 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 TNFRSF18Q9Y5U5 241 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 TRBV20-1A0A075B6N2 111 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 LEPP41159 167 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 MAGEA5P43359 124 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 MEOX1P50221 254 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 PSMG4Q5JS54 123 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 C10orf55Q5SWW7 151 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 GUSBP11Q6P575 273 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 Q6ZS92 163 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 OR10X1Q8NGY0 326 aa10.14□□□□□ -0.79
HERC3-203ENST00000407637 CRIP1P50238 77 aa10.13□□□□□ -0.79
HERC3-203ENST00000407637 WT1-ASQ06250 92 aa10.13□□□□□ -0.79
HERC3-203ENST00000407637 CITED1Q99966 193 aa10.13□□□□□ -0.79
HERC3-203ENST00000407637 OTORQ9NRC9 128 aa10.13□□□□□ -0.79
HERC3-203ENST00000407637 DSCAMO60469 2012 aa10.13□□□□□ -0.79
HERC3-203ENST00000407637 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
HERC3-203ENST00000407637 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.13□□□□□ -0.79
HERC3-203ENST00000407637 MRPS17Q9Y2R5 130 aaKnown RBP10.13□□□□□ -0.79
HERC3-203ENST00000407637 HLA-DRB4P13762 266 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 C17orf58Q2M2W7 97 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 TEN1Q86WV5 123 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 TMEM158Q8WZ71 300 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 AJUBAQ96IF1 538 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 HARBI1Q96MB7 349 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 HLA-DRB4X5D2U9 266 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 LOC107984156A0A0G2JMH3 177 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 GAGE12JA6NER3 117 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 GAGE7O76087 117 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 IL4P05112 153 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 HOXB4P17483 251 aaPredicted RBP10.12□□□□□ -0.79
HERC3-203ENST00000407637 GAGE4Q13068 117 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 TWIST1Q15672 202 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 ARL17AQ8IVW1 177 aa10.12□□□□□ -0.79
HERC3-203ENST00000407637 ZCCHC24Q8N2G6 241 aaKnown RBP10.12□□□□□ -0.79
HERC3-203ENST00000407637 TIMM8AO60220 97 aaPredicted RBP10.11□□□□□ -0.79
HERC3-203ENST00000407637 ZFP2Q6ZN57 461 aa10.11□□□□□ -0.79
HERC3-203ENST00000407637 MRPL35Q9NZE8 188 aaKnown RBP10.11□□□□□ -0.79
HERC3-203ENST00000407637 IGHV3-21A0A0B4J1V1 117 aa10.11□□□□□ -0.79
HERC3-203ENST00000407637 FABP5P3A8MUU1 101 aa10.11□□□□□ -0.79
HERC3-203ENST00000407637 HOXA3O43365 443 aaPredicted RBP10.11□□□□□ -0.79
HERC3-203ENST00000407637 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
HERC3-203ENST00000407637 ZNF688P0C7X2 276 aa10.11□□□□□ -0.79
HERC3-203ENST00000407637 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
HERC3-203ENST00000407637 Q0VFX4 171 aa10.11□□□□□ -0.79
HERC3-203ENST00000407637 SPINK14Q6IE38 97 aa10.11□□□□□ -0.79
HERC3-203ENST00000407637 CFAP47Q6ZTR5 3102 aa10.1□□□□□ -0.79
HERC3-203ENST00000407637 CGB1A6NKQ9 187 aa10.1□□□□□ -0.79
HERC3-203ENST00000407637 C8orf49Q96NF6 230 aa10.1□□□□□ -0.79
HERC3-203ENST00000407637 SRD5A1P18405 259 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms