RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CSN1S1P47710 185 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 TPPP2P59282 170 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 DEFB112Q30KQ8 113 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 Q5PR19 223 aa19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 DAZAP1Q96EP5 407 aaKnown RBP19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 MRPL18Q9H0U6 180 aaKnown RBP19.11■□□□□ 0.65
DNMT3A-206ENST00000406659 DIRC3C9JPN6 131 aa19.1■□□□□ 0.65
DNMT3A-206ENST00000406659 IGHV4-31P0DP07 118 aa19.1■□□□□ 0.65
DNMT3A-206ENST00000406659 SLC35B1P78383 322 aa19.1■□□□□ 0.65
DNMT3A-206ENST00000406659 COX19Q49B96 90 aa19.1■□□□□ 0.65
DNMT3A-206ENST00000406659 COA6Q5JTJ3 125 aaKnown RBP19.1■□□□□ 0.65
DNMT3A-206ENST00000406659 WDR73Q6P4I2 378 aa19.1■□□□□ 0.65
DNMT3A-206ENST00000406659 NOL4LQ96MY1 436 aaPredicted RBP19.1■□□□□ 0.65
DNMT3A-206ENST00000406659 GNB1LQ9BYB4 327 aa19.1■□□□□ 0.65
DNMT3A-206ENST00000406659 H3BUA1 57 aa19.09■□□□□ 0.65
DNMT3A-206ENST00000406659 SMAD5-AS1Q9Y6J3 95 aa19.09■□□□□ 0.65
DNMT3A-206ENST00000406659 SNURFLB1AK76 121 aa19.09■□□□□ 0.65
DNMT3A-206ENST00000406659 M0R3E3 92 aa19.09■□□□□ 0.65
DNMT3A-206ENST00000406659 PSG3Q16557 428 aa19.09■□□□□ 0.65
DNMT3A-206ENST00000406659 TSKUQ8WUA8 353 aa19.09■□□□□ 0.65
DNMT3A-206ENST00000406659 RPP21Q9H633 154 aaKnown RBP19.09■□□□□ 0.65
DNMT3A-206ENST00000406659 PSG8Q9UQ74 426 aa19.09■□□□□ 0.65
DNMT3A-206ENST00000406659 BRI3O95415 125 aa19.08■□□□□ 0.64
DNMT3A-206ENST00000406659 P01737 135 aa19.08■□□□□ 0.64
DNMT3A-206ENST00000406659 FRMD6-AS1P0C7T7 363 aa19.08■□□□□ 0.64
DNMT3A-206ENST00000406659 PPIFP30405 207 aaKnown RBP19.08■□□□□ 0.64
DNMT3A-206ENST00000406659 ZFP30Q9Y2G7 519 aa19.08■□□□□ 0.64
DNMT3A-206ENST00000406659 C19orf71A6NCJ1 209 aa19.07■□□□□ 0.64
DNMT3A-206ENST00000406659 MRPL54Q6P161 138 aaKnown RBP19.07■□□□□ 0.64
DNMT3A-206ENST00000406659 LINC00322Q6ZN03 302 aaPredicted RBP19.07■□□□□ 0.64
DNMT3A-206ENST00000406659 CIARTQ8N365 385 aaPredicted RBP19.07■□□□□ 0.64
DNMT3A-206ENST00000406659 USMG5Q96IX5 58 aa19.07■□□□□ 0.64
DNMT3A-206ENST00000406659 METTL26Q96S19 204 aa19.07■□□□□ 0.64
DNMT3A-206ENST00000406659 NAT8BQ9UHF3 227 aa19.07■□□□□ 0.64
DNMT3A-206ENST00000406659 CLPSL1A2RUU4 121 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 ZNF785A8K8V0 405 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 BUB3O43684 328 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 IGHV4-59P01825 116 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 MT-ND6P03923 174 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 FABP4P15090 132 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 Q6ZS46 218 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 PRSS22Q9GZN4 317 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 SERTM2A0A1B0GWG4 89 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 ZNF253O75346 499 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 ARL3P36405 182 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 ARL6IP6Q8N6S5 226 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 OR10D4PQ8NGN7 298 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 ZNF331Q9NQX6 463 aaPredicted RBP19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 POLQO75417 2590 aa19.06■□□□□ 0.64
DNMT3A-206ENST00000406659 A8MWL6 223 aa19.05■□□□□ 0.64
DNMT3A-206ENST00000406659 PF4V1P10720 104 aa19.05■□□□□ 0.64
DNMT3A-206ENST00000406659 RAB4BP61018 213 aa19.05■□□□□ 0.64
DNMT3A-206ENST00000406659 GBGT1Q8N5D6 347 aa19.05■□□□□ 0.64
DNMT3A-206ENST00000406659 NUP35Q8NFH5 326 aa19.05■□□□□ 0.64
DNMT3A-206ENST00000406659 CELSR1Q9NYQ6 3014 aa19.04■□□□□ 0.64
DNMT3A-206ENST00000406659 PRB4P10163 310 aaPredicted RBP19.04■□□□□ 0.64
DNMT3A-206ENST00000406659 CT83Q5H943 113 aa19.04■□□□□ 0.64
DNMT3A-206ENST00000406659 C1orf194Q5T5A4 169 aa19.04■□□□□ 0.64
DNMT3A-206ENST00000406659 TMEM136Q6ZRR5 245 aa19.04■□□□□ 0.64
DNMT3A-206ENST00000406659 Q96MF0 132 aa19.04■□□□□ 0.64
DNMT3A-206ENST00000406659 NEU1Q99519 415 aa19.04■□□□□ 0.64
DNMT3A-206ENST00000406659 CENPEQ02224 2701 aa19.04■□□□□ 0.64
DNMT3A-206ENST00000406659 A0A087X0K7 114 aa19.03■□□□□ 0.64
DNMT3A-206ENST00000406659 IGHV3-66A0A0C4DH42 116 aa19.03■□□□□ 0.64
DNMT3A-206ENST00000406659 ZNF207O43670 478 aaKnown RBP19.03■□□□□ 0.64
DNMT3A-206ENST00000406659 HIST1H2BLQ99880 126 aa19.03■□□□□ 0.64
DNMT3A-206ENST00000406659 PTPN13Q12923 2485 aa19.03■□□□□ 0.64
DNMT3A-206ENST00000406659 USP9YO00507 2555 aaPredicted RBP19.02■□□□□ 0.64
DNMT3A-206ENST00000406659 HIGD1CA8MV81 97 aa19.02■□□□□ 0.64
DNMT3A-206ENST00000406659 RASL11AQ6T310 242 aa19.02■□□□□ 0.64
DNMT3A-206ENST00000406659 OR4B1Q8NGF8 309 aa19.02■□□□□ 0.64
DNMT3A-206ENST00000406659 OR5R1Q8NH85 324 aa19.02■□□□□ 0.64
DNMT3A-206ENST00000406659 FSHBP01225 129 aa19.01■□□□□ 0.63
DNMT3A-206ENST00000406659 HLA-DQA1P01909 254 aa19.01■□□□□ 0.63
DNMT3A-206ENST00000406659 ZC2HC1AQ96GY0 325 aa19.01■□□□□ 0.63
DNMT3A-206ENST00000406659 KLK15Q9H2R5 256 aa19.01■□□□□ 0.63
DNMT3A-206ENST00000406659 CSPG4Q6UVK1 2322 aa19.01■□□□□ 0.63
DNMT3A-206ENST00000406659 CR1P17927 2039 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 IGHV3OR16-13A0A075B7E8 117 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19■□□□□ 0.63
DNMT3A-206ENST00000406659 IGHV3-74A0A0B4J1X5 117 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 A0A0G2JLM5 398 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 PCP4L1A6NKN8 68 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 CHEK1O14757 476 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 IGLV1-40P01703 118 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 APOHP02749 345 aaPredicted RBP19■□□□□ 0.63
DNMT3A-206ENST00000406659 CRISP2P16562 243 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 IGFL4Q6B9Z1 124 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 PRSS57Q6UWY2 283 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 Q71RC1 249 aaPredicted RBP19■□□□□ 0.63
DNMT3A-206ENST00000406659 TCF24Q7RTU0 167 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 WIPF2Q8TF74 440 aaPredicted RBP19■□□□□ 0.63
DNMT3A-206ENST00000406659 PACRGQ96M98 296 aaPredicted RBP19■□□□□ 0.63
DNMT3A-206ENST00000406659 ASCL2Q99929 193 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 U3KQE9 123 aa19■□□□□ 0.63
DNMT3A-206ENST00000406659 IGKV2-40A0A087WW87 121 aaPredicted RBP18.99■□□□□ 0.63
DNMT3A-206ENST00000406659 IGHV3-49A0A0A0MS15 119 aa18.99■□□□□ 0.63
DNMT3A-206ENST00000406659 NPIPB6E9PJ23 425 aa18.99■□□□□ 0.63
DNMT3A-206ENST00000406659 IGKV2D-40P01614 121 aaPredicted RBP18.99■□□□□ 0.63
DNMT3A-206ENST00000406659 IGHV3-11P01762 117 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms