RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ANKRD50Q9ULJ7 1429 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TARBP1Q13395 1621 aaKnown RBP2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SHROOM2Q13796 1616 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 CC2D2AQ9P2K1 1620 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 NUP210Q8TEM1 1887 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRAV27A0A087WT01 109 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 A8MUN3 132 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 A8MWP4 228 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 G3V3Q6 166 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 LST1O00453 97 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SFT2D2O95562 160 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 NCR2O95944 276 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 MT-ND6P03923 174 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRGV3P03979 118 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TMEM258P61165 79 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 Q0VG73 95 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SPRNQ5BIV9 151 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 C9orf153Q5TBE3 101 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR2T2Q6IF00 324 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 AAED1Q7RTV5 226 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 C1orf174Q8IYL3 243 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 CYTL1Q9NRR1 136 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TAAR3PQ9P1P4 343 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 MPC1Q9Y5U8 109 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 ABCC3O15438 1527 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 CLASP1Q7Z460 1538 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 KNDC1Q76NI1 1749 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 RIC1Q4ADV7 1423 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TET3O43151 1660 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 ITSN2Q9NZM3 1697 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 RAPGEF6Q8TEU7 1601 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 CDK5RAP2Q96SN8 1893 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 CUX1P39880 1505 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGLV2-18A0A075B6J9 118 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGHV3OR15-7A0A075B7D8 119 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 LOC107986453A0A1B0GWG9 222 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 YPEL1O60688 119 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 DEDDO75618 318 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1D-33P01593 117 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1-33P01594 117 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 TCRAP04437 139 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 SMIM10L2AP0DMW4 78 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 SMIM10L2BP0DMW5 78 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 CRYGSP22914 178 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 DAPP51397 102 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 C22orf39Q6P5X5 142 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGFL3Q6UXB1 125 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 ADM2Q7Z4H4 148 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 RPRMLQ8N4K4 120 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 C10orf126Q8N4M7 172 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR2T10Q8NGZ9 312 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 STAG3L4Q8TBR4 150 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 YPEL2Q96QA6 119 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 AMELYQ99218 206 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 RERGLQ9H628 205 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 LINC00527Q9UJ94 153 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 CHCHD2Q9Y6H1 151 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 A0A1B0GUL6 1792 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRPM3Q9HCF6 1732 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 CCDC88AQ3V6T2 1871 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRBV7-6A0A0J9YX20 115 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TCRBV3S1A0A5B6 114 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 MEIS3P1A6NDR6 274 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TMEM235A6NFC5 223 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 M0R378 163 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 HYPMO75409 117 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 APOMO95445 188 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 NAPSAO96009 420 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 CYB5AP00167 134 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 CXCL1P09341 107 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGLC2P0DOY2 106 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGLC3P0DOY3 106 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 PPIBP23284 216 aaKnown RBP2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OPRM1P35372 400 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF90Q03938 601 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 EBLN2Q6P2I7 272 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 SLC25A26Q70HW3 274 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR4B1Q8NGF8 309 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR5D16Q8NGK9 328 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR5C1Q8NGR4 320 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR51H1Q8NH63 302 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 LINC00526Q96FQ7 95 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 C20orf78Q9BR46 151 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 DUSP21Q9H596 190 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TMEM106BQ9NUM4 274 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 GPR179Q6PRD1 2367 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 NCKAP5O14513 1909 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 MYH4Q9Y623 1939 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 KMT2EQ8IZD2 1858 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 IQSEC2Q5JU85 1478 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRPM1Q7Z4N2 1603 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1-12A0A0C4DH73 117 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 RBAKDNA6NC62 111 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 TLCD2A6NGC4 264 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF705FA8MVS1 300 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms