RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 E9PLN8 166 aa10.89□□□□□ -0.67
SNED1-205ENST00000405547 ETV2O00321 342 aaPredicted RBP10.89□□□□□ -0.67
SNED1-205ENST00000405547 RPL15P61313 204 aaKnown RBP10.89□□□□□ -0.67
SNED1-205ENST00000405547 NPFFR1Q9GZQ6 430 aa10.89□□□□□ -0.67
SNED1-205ENST00000405547 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
SNED1-205ENST00000405547 LMO1P25800 156 aa10.89□□□□□ -0.67
SNED1-205ENST00000405547 CD300EQ496F6 205 aaPredicted RBP10.89□□□□□ -0.67
SNED1-205ENST00000405547 IGKV1D-17A0A075B6S4 117 aa10.89□□□□□ -0.67
SNED1-205ENST00000405547 SH2D1AO60880 128 aa10.89□□□□□ -0.67
SNED1-205ENST00000405547 SLC25A20O43772 301 aa10.89□□□□□ -0.67
SNED1-205ENST00000405547 ATXN8Q156A1 80 aa10.89□□□□□ -0.67
SNED1-205ENST00000405547 IGKV1-6A0A0C4DH72 117 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 PAX9P55771 341 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 PRDM6Q9NQX0 595 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 TRGV2A0A075B6R0 118 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 THBDP07204 575 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 C5orf64Q2M2E5 130 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 WNT2P09544 360 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 ARHGAP32A7KAX9 2087 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 DPH3P1Q9H4G8 78 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 BUB1B-PAK6H3BSN5 160 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 VCYO14598 125 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 PLAURQ03405 335 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 NUP37Q8NFH4 326 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 PLEKHB2Q96CS7 222 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 LIME1Q9H400 295 aa10.88□□□□□ -0.67
SNED1-205ENST00000405547 Q0VFX4 171 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 C18orf32Q8TCD1 76 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 SNHG12Q9BXW3 62 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 IGKV1-16P04430 117 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 TDGF1P13385 188 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 CKS1BP61024 79 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 BMPERQ8N8U9 685 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 MDS2Q8NDY4 140 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 PF4P02776 101 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 CDKN1AP38936 164 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 Q5PR19 223 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 EREGO14944 169 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 TMEM75Q8N9X5 138 aa10.87□□□□□ -0.67
SNED1-205ENST00000405547 RSPO3Q9BXY4 272 aaPredicted RBP10.87□□□□□ -0.67
SNED1-205ENST00000405547 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.86□□□□□ -0.67
SNED1-205ENST00000405547 SMAD7O15105 426 aaKnown RBP10.86□□□□□ -0.67
SNED1-205ENST00000405547 STHQ8IWL8 128 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 TMEM8BA6NDV4 472 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 M0R1W7 72 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 LINC00205P59089 165 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 C9orf139Q6ZV77 190 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 GAFA1Q96PS6 74 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 IGKV3D-20A0A0C4DH25 116 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 ZNF672Q499Z4 452 aaPredicted RBP10.86□□□□□ -0.67
SNED1-205ENST00000405547 TMEM158Q8WZ71 300 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 VMO1Q7Z5L0 202 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 GGTLC3B5MD39 225 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 LINC00479Q96M42 142 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 ZNF492Q9P255 531 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 AMN1Q8IY45 258 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 BDP1A6H8Y1 2624 aa10.86□□□□□ -0.67
SNED1-205ENST00000405547 GAGE1Q13065 139 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 ZC2HC1BQ5TFG8 222 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 CFAP161Q6P656 301 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 Q86TA4 180 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 PRSS22Q9GZN4 317 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 TMEM86BQ8N661 226 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 LYPD6BQ8NI32 183 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 TRAV41A0A0B4J266 112 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 LYNX1G3V0Z9 82 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 LYNX1P0DP58 116 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 MMP23AO75900 390 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
SNED1-205ENST00000405547 ANKHD1Q8IWZ3 2542 aaKnown RBP10.85□□□□□ -0.67
SNED1-205ENST00000405547 YPEL3P61236 119 aaPredicted RBP10.85□□□□□ -0.67
SNED1-205ENST00000405547 MALP21145 153 aa10.84□□□□□ -0.67
SNED1-205ENST00000405547 VDAC2P45880 294 aaPredicted RBP10.84□□□□□ -0.67
SNED1-205ENST00000405547 ZNF562Q6V9R5 426 aa10.84□□□□□ -0.67
SNED1-205ENST00000405547 NAA38Q9BRA0 125 aaKnown RBP10.84□□□□□ -0.67
SNED1-205ENST00000405547 GTSF1LQ9H1H1 148 aa10.84□□□□□ -0.67
SNED1-205ENST00000405547 COL4A6Q14031 1691 aa10.84□□□□□ -0.67
SNED1-205ENST00000405547 MBD3L4A6NDZ8 208 aaPredicted RBP10.84□□□□□ -0.67
SNED1-205ENST00000405547 MBD3L3A6NE82 208 aaPredicted RBP10.84□□□□□ -0.67
SNED1-205ENST00000405547 MBD3L5A6NJ08 208 aaPredicted RBP10.84□□□□□ -0.67
SNED1-205ENST00000405547 MBD3L2Q8NHZ7 208 aaPredicted RBP10.84□□□□□ -0.67
SNED1-205ENST00000405547 DSCAMO60469 2012 aa10.84□□□□□ -0.67
SNED1-205ENST00000405547 SRRM4A7MD48 611 aaKnown RBP10.84□□□□□ -0.67
SNED1-205ENST00000405547 CST9LQ9H4G1 147 aa10.83□□□□□ -0.67
SNED1-205ENST00000405547 SPANXA1Q9NS26 97 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 A0A1W2PPI3 338 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 SMIM27A0A1W2PRY6 76 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 CYYR1Q96J86 154 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 SLX1AQ9BQ83 275 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 SHANK2-AS3Q9BTD1 123 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 NCOR1P1Q9H4R4 102 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 OCIAD2Q56VL3 154 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 Q8TAT8 98 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 USMG5Q96IX5 58 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 CHAC1Q9BUX1 264 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 IGLC2P0DOY2 106 aa10.83□□□□□ -0.68
SNED1-205ENST00000405547 IGLC3P0DOY3 106 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms