RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 IGHV3-21A0A0B4J1V1 117 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 PPIAL4CA0A0B4J2A2 164 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 A0A1B0GXF2 115 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 C19orf71A6NCJ1 209 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 ZNF253O75346 499 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 IGLC1P0CG04 106 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 APELAP0DMC3 54 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 PPIAL4GP0DN37 164 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 COX7A1P24310 79 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 CA7P43166 264 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 NUTF2P61970 127 aaKnown RBP5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 SLAQ13239 276 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 ZNF672Q499Z4 452 aaPredicted RBP5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 LDLRAD2Q5SZI1 272 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 Q6ZSV7 163 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 MRPL52Q86TS9 123 aaKnown RBP5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 PPP1R27Q86WC6 154 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 NIT1Q86X76 327 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 C5orf17Q8NAS9 161 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 C18orf32Q8TCD1 76 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 FMC1Q96HJ9 113 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 GPR82Q96P67 336 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 SRSF8Q9BRL6 282 aaKnown RBP5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 MIEN1Q9BRT3 115 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 ATG101Q9BSB4 218 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 Q9H3A6 140 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 NRN1Q9NPD7 142 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 HIF1ANQ9NWT6 349 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 ZNF586Q9NXT0 402 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 MRPL27Q9P0M9 148 aaKnown RBP5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 HIGD1AQ9Y241 93 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 TBL2Q9Y4P3 447 aaKnown RBP5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 ATMQ13315 3056 aa5.28□□□□□ -1.56
CSNK2A1-204ENST00000400227 ARHGAP32A7KAX9 2087 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 ZFHX2Q9C0A1 2572 aaPredicted RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 TRBV6-1A0A0K0K1D8 114 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 INAFM1C9JVW0 142 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 M0R143 59 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 ZNF324O75467 553 aaPredicted RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 LTAP01374 205 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 HIST1H1EP10412 219 aaKnown RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 AMTP48728 403 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 NANOS2P60321 138 aaKnown RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 UBE2G1P62253 170 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 MMDQ15546 238 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 LINC00322Q6ZN03 302 aaPredicted RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 ATP5L2Q7Z4Y8 100 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 MUC15Q8N387 334 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 VN1R17PQ8TDU5 208 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 SRSF12Q8WXF0 261 aaKnown RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 RPEQ96AT9 228 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 TMEM68Q96MH6 324 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 ALKBH7Q9BT30 221 aaPredicted RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 FAM103A1Q9BTL3 118 aaKnown RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 RPP21Q9H633 154 aaKnown RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 OTORQ9NRC9 128 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 PIEZO1Q92508 2521 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 GVINP1Q7Z2Y8 2422 aa5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 SMG1Q96Q15 3661 aaKnown RBP5.27□□□□□ -1.57
CSNK2A1-204ENST00000400227 H3BTX0 84 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 K7EIM0 57 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 IGKV1-17P01599 117 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 TCRAP04437 139 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 C3orf79P0CE67 100 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 PMCHP20382 165 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 CTRLP40313 264 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 KRTDAPP60985 99 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 LEMD1Q68G75 181 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 PRR27Q6MZM9 219 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 C16orf54Q6UWD8 224 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 Q86TA4 180 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 OR11H6Q8NGC7 330 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 OR8B3Q8NGG8 313 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 TMEM190Q8WZ59 177 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 SGK494Q96LW2 274 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 OR8B2Q96RD0 313 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 VAMP8Q9BV40 100 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 SLC25A39Q9BZJ4 359 aaPredicted RBP5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 KALRNO60229 2985 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 MAP1BP46821 2468 aaKnown RBP5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 HIGD1CA8MV81 97 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 A8MWL6 223 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 H3BRN7 92 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 TIMM23O14925 209 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 NDUFA3O95167 84 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 IGLV2-11P01706 119 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 LIPFP07098 398 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 HOXD3P31249 432 aaPredicted RBP5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 LYZP61626 148 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 ZNF705AQ6ZN79 300 aaPredicted RBP5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 TCF24Q7RTU0 167 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 FAM19A2Q8N3H0 131 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 NPBQ8NG41 125 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 OR4B1Q8NGF8 309 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 GTSF1Q8WW33 167 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 RBM14Q96PK6 669 aaKnown RBP5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 SHANK2-AS3Q9BTD1 123 aa5.26□□□□□ -1.57
CSNK2A1-204ENST00000400227 NPFFR1Q9GZQ6 430 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms