RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PFDN1O60925 122 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 HLA-DMBP28068 263 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 DEFB131AP59861 70 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 DEFB1P60022 68 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ZNF726P1Q15940 193 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 IGFL4Q6B9Z1 124 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 LINC00322Q6ZN03 302 aaPredicted RBP9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SAT2Q96F10 170 aaPredicted RBP9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 KRTAP4-6Q9BYQ5 205 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 DNAH9Q9NYC9 4486 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RBMY1BA6NDE4 496 aaKnown RBP9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RBMY1EA6NEQ0 496 aaKnown RBP9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 AGRNO00468 2067 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ISLRO14498 428 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 NDUFB4O95168 129 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RBMY1DP0C7P1 496 aaKnown RBP9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ATF4P18848 351 aaPredicted RBP9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 PSMB3P49720 205 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 MEOX2P50222 304 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RHOBP62745 196 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 TMEM41BQ5BJD5 291 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 PSMG4Q5JS54 123 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 BAP18Q8IXM2 172 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 FXYD5Q96DB9 178 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 HRH4Q9H3N8 390 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SRD5A3Q9H8P0 318 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RNF24Q9Y225 148 aa9.18□□□□□ -0.94
HLA-DQB1-203ENST00000399082 TRBV19A0A075B6N1 114 aa9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 BOLA2-SMG1P6H3BVE0 249 aa9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 HMGB3O15347 200 aaKnown RBP9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 FRMD6-AS1P0C7T7 363 aa9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SEC11BP0C7V7 166 aa9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 HIST1H1EP10412 219 aaKnown RBP9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 CDC34P49427 236 aaPredicted RBP9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RNF182Q8N6D2 247 aa9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RAB24Q969Q5 203 aa9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 OR51M1Q9H341 326 aa9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ZNF331Q9NQX6 463 aaPredicted RBP9.17□□□□□ -0.94
HLA-DQB1-203ENST00000399082 KNCNA6PVL3 124 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 MBP02144 154 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 OR10J4P0C629 311 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 STAG3L2P0CL84 134 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 STAG3L3P0CL85 134 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 TPT1P13693 172 aaKnown RBP9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 FHITP49789 147 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 GDF5OSQ5U4N7 250 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 LCN15Q6UWW0 184 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SLC51BQ86UW2 128 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 TMED6Q8WW62 240 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 PHYHIPLQ96FC7 376 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 C16orf92Q96LL3 132 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 PAXXQ9BUH6 204 aa9.16□□□□□ -0.94
HLA-DQB1-203ENST00000399082 A0A1W2PPV4 95 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 F6UB75 175 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 OR7C2O60412 319 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ZNF253O75346 499 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ARL14EPLP0DKL9 152 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 CMC4P56277 68 aaPredicted RBP9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 KHDC3LQ587J8 217 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 AKR1C8PQ5T2L2 129 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SAMD13Q5VXD3 122 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RNF141Q8WVD5 230 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 LINC00052Q96N35 136 aa9.15□□□□□ -0.94
HLA-DQB1-203ENST00000399082 NBEAP1P0C6P0 100 aa9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 TAS2R45P59539 299 aa9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 EIF5AP63241 154 aaKnown RBP9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 UBE2L3P68036 154 aaKnown RBP9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 PSG3Q16557 428 aa9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 GUK1Q16774 197 aa9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 SBSPONQ8IVN8 264 aa9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 SUN5Q8TC36 379 aa9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 BLNKQ8WV28 456 aa9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 SLC50A1Q9BRV3 221 aa9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
HLA-DQB1-203ENST00000399082 A0A0J9YX75 114 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 CTXND1A0A1B0GTU2 59 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 A8MTW9 85 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ZNF705FA8MVS1 300 aaPredicted RBP9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 PRAC2D3DTV9 90 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 H3BMM0 161 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ID1P41134 155 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 PDE6HQ13956 83 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 TRPT1Q86TN4 253 aaKnown RBP9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 B9D2Q9BPU9 175 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 TUBA4BQ9H853 241 aa9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 HUWE1Q7Z6Z7 4374 aaKnown RBP9.13□□□□□ -0.95
HLA-DQB1-203ENST00000399082 COL7A1Q02388 2944 aa9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 UMAD1C9J7I0 102 aa9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 M0R3E3 92 aa9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 GIG44P09565 113 aaPredicted RBP9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ZNF705DP0CH99 300 aaPredicted RBP9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ZNF705BP0CI00 300 aaPredicted RBP9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms