RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 C2orf83Q53S99 150 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 ZNF705AQ6ZN79 300 aaPredicted RBP8.6□□□□□ -1.03
TFF3-202ENST00000398431 OR52E5Q8NH55 327 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 Q8WTZ3 238 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 NDUFAF3Q9BU61 184 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 PBDC1Q9BVG4 233 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 SEPSECSQ9HD40 501 aaKnown RBP8.6□□□□□ -1.03
TFF3-202ENST00000398431 ENY2Q9NPA8 101 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 CACNG5Q9UF02 275 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 PKHD1P08F94 4074 aa8.6□□□□□ -1.03
TFF3-202ENST00000398431 ZNF705FA8MVS1 300 aaPredicted RBP8.59□□□□□ -1.03
TFF3-202ENST00000398431 WRBO00258 174 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
TFF3-202ENST00000398431 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
TFF3-202ENST00000398431 OR10J1P30954 320 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 CAMLGP49069 296 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 DEFB1P60022 68 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 RAB2AP61019 212 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 FLI1Q01543 452 aaPredicted RBP8.59□□□□□ -1.03
TFF3-202ENST00000398431 GDF5OSQ5U4N7 250 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 Q6ZR54 194 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 RNASE11Q8TAA1 199 aaKnown RBP8.59□□□□□ -1.03
TFF3-202ENST00000398431 NEU1Q99519 415 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 ARV1Q9H2C2 271 aa8.59□□□□□ -1.03
TFF3-202ENST00000398431 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.59□□□□□ -1.03
TFF3-202ENST00000398431 UMAD1C9J7I0 102 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 NPY1RP25929 384 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 BAXQ07812 192 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 Q6ZRG5 221 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 OR4D5Q8NGN0 318 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 RNASEH2CQ8TDP1 164 aaKnown RBP8.58□□□□□ -1.04
TFF3-202ENST00000398431 NPIPB3Q92617 1050 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 GNPNAT1Q96EK6 184 aaPredicted RBP8.58□□□□□ -1.04
TFF3-202ENST00000398431 C1QTNF4Q9BXJ3 329 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 SMIM3Q9BZL3 60 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 SMDT1Q9H4I9 107 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 NRN1Q9NPD7 142 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 HEYLQ9NQ87 328 aaPredicted RBP8.58□□□□□ -1.04
TFF3-202ENST00000398431 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
TFF3-202ENST00000398431 RCL1Q9Y2P8 373 aaKnown RBP8.58□□□□□ -1.04
TFF3-202ENST00000398431 SCGB2A1O75556 95 aa8.57□□□□□ -1.04
TFF3-202ENST00000398431 TOMM40O96008 361 aa8.57□□□□□ -1.04
TFF3-202ENST00000398431 IL4P05112 153 aa8.57□□□□□ -1.04
TFF3-202ENST00000398431 HLA-DRB4P13762 266 aa8.57□□□□□ -1.04
TFF3-202ENST00000398431 NUTF2P61970 127 aaKnown RBP8.57□□□□□ -1.04
TFF3-202ENST00000398431 HSPB7Q9UBY9 170 aa8.57□□□□□ -1.04
TFF3-202ENST00000398431 HLA-DRB4X5D2U9 266 aa8.57□□□□□ -1.04
TFF3-202ENST00000398431 SMIM9A6NGZ8 99 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 SPART-AS1P0CW21 52 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 RD3LP0DJH9 198 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 PSG1P11464 419 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 FXYD7P58549 80 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 SNRPD3P62318 126 aaKnown RBP8.56□□□□□ -1.04
TFF3-202ENST00000398431 SMUG1Q53HV7 270 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 SIGLEC15Q6ZMC9 328 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 SLC24A4Q8NFF2 622 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 OR51G1Q8NGK1 321 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 LYPD6BQ8NI32 183 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 DKK2Q9UBU2 259 aa8.56□□□□□ -1.04
TFF3-202ENST00000398431 NACAE9PAV3 2078 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 SFTA3P0C7M3 94 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 EMP1P54849 157 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 ID3Q02535 119 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 AKR1C1Q04828 323 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 ATRAIDQ6UW56 229 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 DPPA3Q6W0C5 159 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 STX12Q86Y82 276 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 ZNF709Q8N972 641 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 CLUHP3Q96NS8 147 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 EIF5A2Q9GZV4 153 aaKnown RBP8.55□□□□□ -1.04
TFF3-202ENST00000398431 SMCO4Q9NRQ5 59 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 LYRM2Q9NU23 88 aaPredicted RBP8.55□□□□□ -1.04
TFF3-202ENST00000398431 CACFD1Q9UGQ2 172 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 PRELID1Q9Y255 219 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
TFF3-202ENST00000398431 IGKV1D-37A0A075B6S9 117 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 TMEM189A5PLL7 270 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 CEBPZOSA8MTT3 80 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 SOCS3O14543 225 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 IFNA10P01566 189 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 IFNA5P01569 189 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 IGKV3-20P01619 116 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 HBE1P02100 147 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 GUK1Q16774 197 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 ETFRF1Q6IPR1 90 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 ZNF575Q86XF7 245 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 C1orf158Q8N1D5 194 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 ACY3Q96HD9 319 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 FAM210BQ96KR6 192 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 SAV1Q9H4B6 383 aaPredicted RBP8.54□□□□□ -1.04
TFF3-202ENST00000398431 C11orf1Q9H5F2 150 aa8.54□□□□□ -1.04
TFF3-202ENST00000398431 IGHV3OR16-12A0A075B7B8 117 aa8.53□□□□□ -1.04
TFF3-202ENST00000398431 FAM74A7A6NL05 159 aa8.53□□□□□ -1.04
TFF3-202ENST00000398431 AGPAT2O15120 278 aa8.53□□□□□ -1.04
TFF3-202ENST00000398431 SSSCA1O60232 199 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms