RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 HERV-K104P63124 156 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 HBBP68871 147 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 PRR30Q53SZ7 412 aaPredicted RBP4.04□□□□□ -1.76
SSR1-202ENST00000397511 RUSC1-AS1Q66K80 236 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 C8orf86Q6ZUL3 223 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 FAM231DQ6ZW35 169 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 BOD1L2Q8IYS8 172 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 TTC9CQ8N5M4 171 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 OR10X1Q8NGY0 326 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 DDB2Q92466 427 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 FAM168AQ92567 244 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 IGF2BP2-AS1Q96M15 143 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 ASCL2Q99929 193 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 TPSG1Q9NRR2 321 aa4.04□□□□□ -1.76
SSR1-202ENST00000397511 MBD3L4A6NDZ8 208 aaPredicted RBP4.03□□□□□ -1.76
SSR1-202ENST00000397511 MBD3L3A6NE82 208 aaPredicted RBP4.03□□□□□ -1.76
SSR1-202ENST00000397511 MBD3L5A6NJ08 208 aaPredicted RBP4.03□□□□□ -1.76
SSR1-202ENST00000397511 HIGD1CA8MV81 97 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 MOSP00540 346 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 ORM2P19652 201 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 GATA4P43694 442 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 BSPH1Q075Z2 132 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 MZT1Q08AG7 82 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 WFDC2Q14508 124 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 MBD3L2Q8NHZ7 208 aaPredicted RBP4.03□□□□□ -1.76
SSR1-202ENST00000397511 RNF183Q96D59 192 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 PTPRQQ9UMZ3 2332 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 LSM4Q9Y4Z0 139 aaKnown RBP4.03□□□□□ -1.76
SSR1-202ENST00000397511 A0A1B0GXF2 115 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 A0A1W2PRD5 423 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 A0A1W2PRF3 423 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 A0A1W2PRM7 423 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 VWC2LB2RUY7 222 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 GGTLC3B5MD39 225 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 CD24P25063 80 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 ATP5G2Q06055 141 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 ETDBQ3ZM63 59 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 NPIPB3Q92617 1050 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 ANAPC13Q9BS18 74 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 TMEM14BQ9NUH8 114 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 CRYBG3Q68DQ2 2970 aa4.03□□□□□ -1.76
SSR1-202ENST00000397511 FCN3O75636 299 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 LY6HO94772 140 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 CNTFRP26992 372 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 CSN1S1P47710 185 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 GNG5P63218 68 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 IGFL2Q6UWQ7 119 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 PIP4P1Q86T03 277 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 RBMXL3Q8N7X1 1067 aaKnown RBP4.02□□□□□ -1.77
SSR1-202ENST00000397511 ZNF503Q96F45 646 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 MRPL36Q9P0J6 103 aaKnown RBP4.02□□□□□ -1.77
SSR1-202ENST00000397511 SOX21Q9Y651 276 aaPredicted RBP4.02□□□□□ -1.77
SSR1-202ENST00000397511 A0A0G2JNJ9 132 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 hADV38S2A0JD32 116 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 CGB3P0DN86 165 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 CGB7P0DN87 165 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 GATA3P23771 443 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 TMPRSS3P57727 454 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 UBE2L3P68036 154 aaKnown RBP4.02□□□□□ -1.77
SSR1-202ENST00000397511 TMEM200BQ69YZ2 307 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 SH2D6Q7Z4S9 175 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 ZNF502Q8TBZ5 544 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 GTSF1Q8WW33 167 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 ARPC1AQ92747 370 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 Q9UFV3 132 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 S4R3C0 116 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 A8MWL6 223 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 UPK2O00526 184 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 CHEK1O14757 476 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 CNIH1O95406 144 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 GCSHP23434 173 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 ARL3P36405 182 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 WT1-ASQ06250 92 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 KLRD1Q13241 179 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 GAGE13Q4V321 117 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 TMEM116Q8NCL8 245 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 FLYWCH2Q96CP2 140 aaKnown RBP4.02□□□□□ -1.77
SSR1-202ENST00000397511 ZNF714Q96N38 554 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 NDFIP1Q9BT67 221 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 ZNF747Q9BV97 191 aa4.02□□□□□ -1.77
SSR1-202ENST00000397511 RPUSD1Q9UJJ7 312 aaKnown RBP4.02□□□□□ -1.77
SSR1-202ENST00000397511 FOXA2Q9Y261 457 aaPredicted RBP4.02□□□□□ -1.77
SSR1-202ENST00000397511 IGLV3-9A0A075B6K5 115 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 A0A1B0GW15 77 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 PRR20EP86478 221 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 PRR20CP86479 221 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 PRR20DP86480 221 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 PRR20BP86481 221 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 PRR20AP86496 221 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 PRCDQ00LT1 54 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 SLC25A48Q6ZT89 311 aaKnown RBP4.01□□□□□ -1.77
SSR1-202ENST00000397511 CACNG8Q8WXS5 425 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 DYNLRB1Q9NP97 96 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 NGBQ9NPG2 151 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 AP5S1Q9NUS5 200 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 PRNDQ9UKY0 176 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 TRGV8A0A0C4DH27 118 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 C17orf100A8MU93 164 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 B5MCH6 92 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 C16orf97H3BN30 126 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms