RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SPACA3Q8IXA5 215 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 FAM231BA6NCW3 169 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 C8orf49Q96NF6 230 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 DDX60LQ5H9U9 1706 aaKnown RBP10.05□□□□□ -0.8
SMU1-201ENST00000397149 TRBV6-7A0A0A0MS04 114 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 A0A1B0GWJ7 208 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 DLEU1O43261 78 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 FAM90A1Q86YD7 464 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 WFDC1Q9HC57 220 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 LRCOL1A6NCL2 159 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 UTF1Q5T230 341 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 TREML4Q6UXN2 200 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 I3L3M4 83 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 IGHV1-8P0DP01 117 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 A0A0A6YYD4 124 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 UBE2V1Q13404 147 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 Q96MF0 132 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 UBE2AP49459 152 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 LINC01356Q8N9X3 169 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 SS18L2Q9UHA2 77 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 MTCL1Q9Y4B5 1905 aaKnown RBP10.04□□□□□ -0.8
SMU1-201ENST00000397149 EFNA2O43921 213 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 RFNGQ9Y644 331 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 IGFBP3P17936 291 aaPredicted RBP10.04□□□□□ -0.8
SMU1-201ENST00000397149 WBP1Q96G27 269 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 SPRR3Q9UBC9 169 aa10.04□□□□□ -0.8
SMU1-201ENST00000397149 MST1LQ2TV78 715 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 IL18BPO95998 194 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 BPESC1Q9GZL8 116 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 AHDC1Q5TGY3 1603 aaPredicted RBP10.03□□□□□ -0.8
SMU1-201ENST00000397149 A0A1B0GX51 115 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 LINC01619G3V211 115 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 NDUFC2O95298 119 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 CACNA1IQ9P0X4 2223 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 AKAP11Q9UKA4 1901 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 H0Y9J4 135 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 IGKV4-1P06312 121 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 BOD1L2Q8IYS8 172 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 CFHR4Q92496 578 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 IGLV10-54A0A075B6I4 117 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 RNF222A6NCQ9 220 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 MP68P56378 58 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 RPP25LQ8N5L8 163 aaKnown RBP10.03□□□□□ -0.8
SMU1-201ENST00000397149 DAZ1Q9NQZ3 744 aaKnown RBP10.03□□□□□ -0.8
SMU1-201ENST00000397149 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
SMU1-201ENST00000397149 LINC00205P59089 165 aa10.02□□□□□ -0.8
SMU1-201ENST00000397149 MLANAQ16655 118 aa10.02□□□□□ -0.8
SMU1-201ENST00000397149 C5orf67F2Z3F1 127 aa10.02□□□□□ -0.8
SMU1-201ENST00000397149 PROP1O75360 226 aa10.02□□□□□ -0.8
SMU1-201ENST00000397149 CASC2Q6XLA1 102 aa10.02□□□□□ -0.8
SMU1-201ENST00000397149 LINC00479Q96M42 142 aa10.02□□□□□ -0.8
SMU1-201ENST00000397149 ADAMTSL3P82987 1691 aa10.02□□□□□ -0.8
SMU1-201ENST00000397149 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMU1-201ENST00000397149 HGFACQ04756 655 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 SAA4P35542 130 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 MRPL14Q6P1L8 145 aaKnown RBP10.02□□□□□ -0.81
SMU1-201ENST00000397149 USMG5Q96IX5 58 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 DYSFO75923 2080 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 TJP1Q07157 1748 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 HIST3H2BBQ8N257 126 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 RNF126Q9BV68 326 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 FOXE3Q13461 319 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 C5orf64Q2M2E5 130 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 LINC01559Q495D7 138 aa10.02□□□□□ -0.81
SMU1-201ENST00000397149 DOCK2Q92608 1830 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 C9orf47Q6ZRZ4 202 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 AGMATQ9BSE5 352 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 NACAE9PAV3 2078 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 IGHV3-30P01768 117 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 IGHV3-33P01772 117 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 IGHV3-30-3P0DP02 117 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 IGHV3-30-5P0DP03 117 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 ETDBQ3ZM63 59 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 EPOPA6NHQ4 379 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 TRPM3Q9HCF6 1732 aaPredicted RBP10.01□□□□□ -0.81
SMU1-201ENST00000397149 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 MYO16Q9Y6X6 1858 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 WIPF2Q8TF74 440 aaPredicted RBP10.01□□□□□ -0.81
SMU1-201ENST00000397149 BRK1Q8WUW1 75 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 PLCE1Q9P212 2302 aa10.01□□□□□ -0.81
SMU1-201ENST00000397149 GLRX5Q86SX6 157 aa10□□□□□ -0.81
SMU1-201ENST00000397149 TP53BP1Q12888 1972 aaPredicted RBP10□□□□□ -0.81
SMU1-201ENST00000397149 IGHV1OR15-1A0A075B7D0 117 aa10□□□□□ -0.81
SMU1-201ENST00000397149 TRAV13-2A0A0B4J235 113 aa10□□□□□ -0.81
SMU1-201ENST00000397149 FAM223BA6NKX1 122 aa10□□□□□ -0.81
SMU1-201ENST00000397149 IGKV1D-12P01611 117 aa10□□□□□ -0.81
SMU1-201ENST00000397149 SLAQ13239 276 aa10□□□□□ -0.81
SMU1-201ENST00000397149 SP5Q6BEB4 398 aaPredicted RBP10□□□□□ -0.81
SMU1-201ENST00000397149 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
SMU1-201ENST00000397149 HEPN1Q6WQI6 88 aa10□□□□□ -0.81
SMU1-201ENST00000397149 C5orf24Q7Z6I8 188 aa10□□□□□ -0.81
SMU1-201ENST00000397149 FAM223AQ8IWN6 122 aa10□□□□□ -0.81
SMU1-201ENST00000397149 E9PLN8 166 aa10□□□□□ -0.81
SMU1-201ENST00000397149 K7ERJ3 54 aa10□□□□□ -0.81
SMU1-201ENST00000397149 CFHR1Q03591 330 aa10□□□□□ -0.81
SMU1-201ENST00000397149 SEM1Q6ZVN7 128 aa10□□□□□ -0.81
SMU1-201ENST00000397149 MPLKIPQ8TAP9 179 aa10□□□□□ -0.81
SMU1-201ENST00000397149 IGFBPL1Q8WX77 278 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms