RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 OR2K2Q8NGT1 345 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 RNF166Q96A37 237 aaPredicted RBP10.54□□□□□ -0.72
GREB1-206ENST00000396123 BPESC1Q9GZL8 116 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 A6NNC1 897 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 SAA4P35542 130 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 GTSCR1Q86UQ5 136 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 SHANK1Q9Y566 2161 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 HOXA3O43365 443 aaPredicted RBP10.54□□□□□ -0.72
GREB1-206ENST00000396123 CD28P10747 220 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 NSUN5P1Q3KNT7 163 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 CD300EQ496F6 205 aaPredicted RBP10.54□□□□□ -0.72
GREB1-206ENST00000396123 OR5A1Q8NGJ0 315 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 SELENOKQ9Y6D0 94 aa10.54□□□□□ -0.72
GREB1-206ENST00000396123 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 PRR30Q53SZ7 412 aaPredicted RBP10.53□□□□□ -0.72
GREB1-206ENST00000396123 HAPLN4Q86UW8 402 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 MTURNQ8N3F0 131 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 RNF138Q8WVD3 245 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 CYYR1Q96J86 154 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 DOCK11Q5JSL3 2073 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 IGLV3-9A0A075B6K5 115 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 FAM223BA6NKX1 122 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 K7ENP7 123 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
GREB1-206ENST00000396123 FAM223AQ8IWN6 122 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 RNF182Q8N6D2 247 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 DPH3P1Q9H4G8 78 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 DENND4CQ5VZ89 1909 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 FXYD7P58549 80 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 GUSBP1Q15486 140 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 TEX36Q5VZQ5 186 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 TMEM8BA6NDV4 472 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 LOXP28300 417 aaPredicted RBP10.53□□□□□ -0.72
GREB1-206ENST00000396123 ZNF134P52741 427 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 ZNF492Q9P255 531 aa10.53□□□□□ -0.72
GREB1-206ENST00000396123 TDGF1P13385 188 aa10.52□□□□□ -0.72
GREB1-206ENST00000396123 CFAP161Q6P656 301 aa10.52□□□□□ -0.72
GREB1-206ENST00000396123 IGKV3D-20A0A0C4DH25 116 aa10.52□□□□□ -0.73
GREB1-206ENST00000396123 YPEL3P61236 119 aaPredicted RBP10.52□□□□□ -0.73
GREB1-206ENST00000396123 DOCK10Q96BY6 2186 aa10.52□□□□□ -0.73
GREB1-206ENST00000396123 FAM231BA6NCW3 169 aa10.52□□□□□ -0.73
GREB1-206ENST00000396123 ZNF479Q96JC4 524 aa10.52□□□□□ -0.73
GREB1-206ENST00000396123 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.52□□□□□ -0.732e-8■■□□□ 14.1
GREB1-206ENST00000396123 SLC25A16P16260 332 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 NUP210Q8TEM1 1887 aaPredicted RBP10.51□□□□□ -0.73
GREB1-206ENST00000396123 TRGV4A0A0C4DH28 118 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 ARMS2P0C7Q2 107 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 PLNP26678 52 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 FCN3O75636 299 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 CT83Q5H943 113 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 MEGF9Q9H1U4 602 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 GGTLC3B5MD39 225 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 DKK1O94907 266 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 TMEM75Q8N9X5 138 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 RHPN1-AS1Q9BWJ2 59 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 FAM215AQ9Y5M1 114 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 KIAA1671Q9BY89 1806 aa10.51□□□□□ -0.73
GREB1-206ENST00000396123 TRAV12-3A0A0B4J271 114 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 TRBV7-9A0A0J9YWB2 115 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 UBE2E1P51965 193 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 WT1-ASQ06250 92 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 MMP23AO75900 390 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 SAMD5Q5TGI4 173 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 MPV17L2Q567V2 206 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
GREB1-206ENST00000396123 C18orf32Q8TCD1 76 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 SMKR1H3BMG3 65 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 DLEU1O43261 78 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 SAP30O75446 220 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 NDUFB8O95169 186 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 ZNF876PQ49A33 203 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 MRPL52Q86TS9 123 aaKnown RBP10.5□□□□□ -0.73
GREB1-206ENST00000396123 BCL6BQ8N143 479 aaPredicted RBP10.5□□□□□ -0.73
GREB1-206ENST00000396123 TMEM158Q8WZ71 300 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 GTF3C1Q12789 2109 aa10.5□□□□□ -0.73
GREB1-206ENST00000396123 A0A1B0GUS0 222 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 TMEM249Q2WGJ8 235 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 FAM110DQ8TAY7 271 aaPredicted RBP10.49□□□□□ -0.73
GREB1-206ENST00000396123 SSC4DQ8WTU2 575 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 MED13LQ71F56 2210 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 TRBV19A0A075B6N1 114 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 VCYO14598 125 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 ERCC8Q13216 396 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 PLXNB3Q9ULL4 1909 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 RCHY1Q96PM5 261 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 TSPAN13O95857 204 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 ZNF124Q15973 351 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 A0A087X0K7 114 aa10.49□□□□□ -0.73
GREB1-206ENST00000396123 ATP6V0E1O15342 81 aa10.48□□□□□ -0.73
GREB1-206ENST00000396123 MALP21145 153 aa10.48□□□□□ -0.73
GREB1-206ENST00000396123 FAM231DQ6ZW35 169 aa10.48□□□□□ -0.73
GREB1-206ENST00000396123 LYPD6BQ8NI32 183 aa10.48□□□□□ -0.73
GREB1-206ENST00000396123 DAZ1Q9NQZ3 744 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms