RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MORN5Q5VZ52 161 aa12.22□□□□□ -0.45
CXCL1-201ENST00000395761 DPPA3Q6W0C5 159 aa12.22□□□□□ -0.45
CXCL1-201ENST00000395761 SEPSECSQ9HD40 501 aaKnown RBP12.22□□□□□ -0.45
CXCL1-201ENST00000395761 RETNQ9HD89 108 aa12.22□□□□□ -0.45
CXCL1-201ENST00000395761 U3KQK5 164 aa12.22□□□□□ -0.45
CXCL1-201ENST00000395761 TENM3Q9P273 2699 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 KNCNA6PVL3 124 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 SOCS3O14543 225 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 SULT1A2P50226 295 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 RHOBP62745 196 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 FAM78BQ5VT40 261 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 TEX261Q6UWH6 196 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 ZMAT4Q9H898 229 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 FUT9Q9Y231 359 aa12.21□□□□□ -0.45
CXCL1-201ENST00000395761 TRAV5A0A0B4J249 113 aa12.2□□□□□ -0.46
CXCL1-201ENST00000395761 A0A1W2PPV4 95 aa12.2□□□□□ -0.46
CXCL1-201ENST00000395761 GPR82Q96P67 336 aa12.2□□□□□ -0.46
CXCL1-201ENST00000395761 RCHY1Q96PM5 261 aa12.2□□□□□ -0.46
CXCL1-201ENST00000395761 SPATA25Q9BR10 227 aa12.2□□□□□ -0.46
CXCL1-201ENST00000395761 ACTR3CQ9C0K3 210 aaPredicted RBP12.2□□□□□ -0.46
CXCL1-201ENST00000395761 RPL7P18124 248 aaKnown RBP12.19□□□□□ -0.46
CXCL1-201ENST00000395761 DEFB1P60022 68 aa12.19□□□□□ -0.46
CXCL1-201ENST00000395761 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
CXCL1-201ENST00000395761 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
CXCL1-201ENST00000395761 FAM122CQ6P4D5 195 aa12.19□□□□□ -0.46
CXCL1-201ENST00000395761 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
CXCL1-201ENST00000395761 MIR17HGQ75NE6 70 aa12.19□□□□□ -0.46
CXCL1-201ENST00000395761 FAM167A-AS1Q96KT0 104 aa12.19□□□□□ -0.46
CXCL1-201ENST00000395761 LINC00052Q96N35 136 aa12.19□□□□□ -0.46
CXCL1-201ENST00000395761 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
CXCL1-201ENST00000395761 SNRPCP09234 159 aaKnown RBP12.18□□□□□ -0.46
CXCL1-201ENST00000395761 ATF4P18848 351 aaPredicted RBP12.18□□□□□ -0.46
CXCL1-201ENST00000395761 ID1P41134 155 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 CDC34P49427 236 aaPredicted RBP12.18□□□□□ -0.46
CXCL1-201ENST00000395761 PSMB3P49720 205 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 TAS2R45P59539 299 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 ACTL10Q5JWF8 245 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 SPATA31B1PQ5VZV4 182 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 ZNF680Q8NEM1 530 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 RNF141Q8WVD5 230 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 MBD3L1Q8WWY6 194 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 RAB24Q969Q5 203 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 C16orf92Q96LL3 132 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 C20orf173Q96LM9 149 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 TMEM14CQ9P0S9 112 aa12.18□□□□□ -0.46
CXCL1-201ENST00000395761 TRAV8-2A0A0B4J237 113 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 KIR2DL5BA0A0G2JN68 375 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 KIR2DL5BA0A0G2JPC4 375 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 CTXND1A0A1B0GTU2 59 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 IFNA7P01567 189 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 STAG3L2P0CL84 134 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 STAG3L3P0CL85 134 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 APOC4P55056 127 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 ZNF726P1Q15940 193 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 BPIFA4PQ86YQ2 179 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 KIR2DL5AQ8N109 375 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 KIR2DL5BQ8NHK3 375 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 SLC25A2Q9BXI2 301 aa12.17□□□□□ -0.46
CXCL1-201ENST00000395761 A0A087X0K7 114 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 ISLRO14498 428 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 FHITP49789 147 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 MEOX2P50222 304 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 FAM74A1Q5RGS3 127 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 PQLC2Q6ZP29 291 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 TRPT1Q86TN4 253 aaKnown RBP12.16□□□□□ -0.46
CXCL1-201ENST00000395761 STHQ8IWL8 128 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 LRRC20Q8TCA0 184 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 CSTL1Q9H114 145 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 STAB2Q8WWQ8 2551 aa12.16□□□□□ -0.46
CXCL1-201ENST00000395761 H3BTX0 84 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 IFITM2Q01629 132 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 KHDC3LQ587J8 217 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 GDF5OSQ5U4N7 250 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 RNF182Q8N6D2 247 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 FAM213BQ8TBF2 198 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 SAT2Q96F10 170 aaPredicted RBP12.15□□□□□ -0.46
CXCL1-201ENST00000395761 ZNF503Q96F45 646 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 OVOL2Q9BRP0 275 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 OR51M1Q9H341 326 aa12.15□□□□□ -0.46
CXCL1-201ENST00000395761 AGRNO00468 2067 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 TRAV1-1A0A0B4J248 108 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 H3BQ15 152 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 UBE2CO00762 179 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 BLOC1S1P78537 153 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 DEFB135Q30KP9 77 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 SAMD13Q5VXD3 122 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 SSX7Q7RTT5 188 aa12.14□□□□□ -0.47
CXCL1-201ENST00000395761 ZNF705EA8MWA4 302 aaPredicted RBP12.13□□□□□ -0.47
CXCL1-201ENST00000395761 F6UB75 175 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 H3BMM0 161 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 CXorf1O96002 111 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 GIG44P09565 113 aaPredicted RBP12.13□□□□□ -0.47
CXCL1-201ENST00000395761 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
CXCL1-201ENST00000395761 HLA-DMBP28068 263 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 Q6ZWC4 215 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 ZNF767PQ75MW2 155 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 SUN5Q8TC36 379 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms