RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PRM2P04554 102 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 AZU1P20160 251 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 CCL18P55774 89 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 POLR2GP62487 172 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 PSG3Q16557 428 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 ZNF575Q86XF7 245 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 C20orf144Q9BQM9 153 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 PSENENQ9NZ42 101 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 TIMM8BQ9Y5J9 83 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 TRAV12-2A0A075B6T6 113 aa12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 LINC00854A0A1B0GVQ3 168 aa12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 F5H768 121 aa12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 CDK2AP2O75956 126 aa12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 CDKN1BP46527 198 aa12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 HIST1H1AQ02539 215 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 TMEM14EPQ6UXP3 125 aa12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 LINC01587Q99440 93 aa12.25□□□□□ -0.45
SNRPA1-202ENST00000394082 SMCO3A2RU48 225 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 MRPS12O15235 138 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 ADAP1O75689 374 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 OR5G3P0C626 314 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 IL7P13232 177 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 TAS2R30P59541 319 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 RHOBP62745 196 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 TEPPQ6URK8 271 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 RNASE8Q8TDE3 154 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 TMEM263Q8WUH6 116 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 UHRF2Q96PU4 802 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 PPP1R14DQ9NXH3 145 aa12.24□□□□□ -0.45
SNRPA1-202ENST00000394082 A6NHS1 94 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 H7BYZ3 331 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 NDUFB6O95139 128 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 TNP2Q05952 138 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 CNPY1Q3B7I2 92 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 LCN15Q6UWW0 184 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 PATE2Q6UY27 113 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 LINC00299Q6ZSB3 139 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 OR10P1Q8NGE3 313 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 LRRC20Q8TCA0 184 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 RPUSD4Q96CM3 377 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 ZNF503Q96F45 646 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 SDHCQ99643 169 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 SLC50A1Q9BRV3 221 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 GGACTQ9BVM4 153 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 ARL6Q9H0F7 186 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 ARV1Q9H2C2 271 aa12.23□□□□□ -0.45
SNRPA1-202ENST00000394082 LRP1BQ9NZR2 4599 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 SSSCA1O60232 199 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 TSC22D2O75157 780 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 NUDT3O95989 172 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 FCN2Q15485 313 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 ZNF546Q86UE3 836 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 LINC00612Q8N6U2 182 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 OR10J6PQ8NGY7 276 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 ZNF331Q9NQX6 463 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 MGAT4CQ9UBM8 478 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 LINC00588Q9Y4M8 146 aa12.22□□□□□ -0.45
SNRPA1-202ENST00000394082 RNF141Q8WVD5 230 aa12.21□□□□□ -0.45
SNRPA1-202ENST00000394082 S100ZQ8WXG8 99 aa12.21□□□□□ -0.45
SNRPA1-202ENST00000394082 BATF3Q9NR55 127 aa12.21□□□□□ -0.45
SNRPA1-202ENST00000394082 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
SNRPA1-202ENST00000394082 OR4E1P0C645 316 aa12.2□□□□□ -0.46
SNRPA1-202ENST00000394082 METTL15P1P0C7V9 234 aa12.2□□□□□ -0.46
SNRPA1-202ENST00000394082 ANXA7P20073 488 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-202ENST00000394082 BPIFA4PQ86YQ2 179 aa12.2□□□□□ -0.46
SNRPA1-202ENST00000394082 CCDC32Q9BV29 185 aa12.2□□□□□ -0.46
SNRPA1-202ENST00000394082 KRTAP4-5Q9BYR2 181 aa12.2□□□□□ -0.46
SNRPA1-202ENST00000394082 PTTG2Q9NZH5 202 aa12.2□□□□□ -0.46
SNRPA1-202ENST00000394082 H3BNG1 76 aa12.19□□□□□ -0.46
SNRPA1-202ENST00000394082 GOSR2O14653 212 aa12.19□□□□□ -0.46
SNRPA1-202ENST00000394082 BTF3P20290 206 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-202ENST00000394082 RRAS2P62070 204 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-202ENST00000394082 CLINT1Q14677 625 aa12.19□□□□□ -0.46
SNRPA1-202ENST00000394082 LINC00305Q7Z4B0 112 aa12.19□□□□□ -0.46
SNRPA1-202ENST00000394082 NOP10Q9NPE3 64 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-202ENST00000394082 CCNKO75909 580 aa12.18□□□□□ -0.46
SNRPA1-202ENST00000394082 HTN1P15515 57 aa12.18□□□□□ -0.46
SNRPA1-202ENST00000394082 SLC38A11Q08AI6 406 aa12.18□□□□□ -0.46
SNRPA1-202ENST00000394082 TTC32Q5I0X7 151 aa12.18□□□□□ -0.46
SNRPA1-202ENST00000394082 SSX7Q7RTT5 188 aa12.18□□□□□ -0.46
SNRPA1-202ENST00000394082 ODF3Q96PU9 254 aa12.18□□□□□ -0.46
SNRPA1-202ENST00000394082 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
SNRPA1-202ENST00000394082 AGPAT2O15120 278 aa12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 LYRM1O43325 122 aa12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 M6PRP20645 277 aa12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 CCDC28AQ8IWP9 274 aa12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 Q9H8V8 135 aa12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 PXMP4Q9Y6I8 212 aa12.17□□□□□ -0.46
SNRPA1-202ENST00000394082 A0A1W2PPQ1 181 aa12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 IGLC2P0DOY2 106 aa12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 BTCP35070 178 aa12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 GUK1Q16774 197 aa12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 ZBTB8BQ8NAP8 495 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 MITD1Q8WV92 249 aa12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 TMEM37Q8WXS4 190 aa12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 GNPNAT1Q96EK6 184 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms