RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 CNTRLQ7Z7A1 2325 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 HELZP42694 1942 aaKnown RBP0.72□□□□□ -2.29
MDM2-208ENST00000393410 TRDV1A0A1B0GX56 115 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 MAP1LC3B2A6NCE7 125 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 C5orf67F2Z3F1 127 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 F8W036 122 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 GABARAPH6UMI1 98 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 GGCTO75223 188 aaKnown RBP0.72□□□□□ -2.29
MDM2-208ENST00000393410 DHFRP00374 187 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 NEFHP12036 1026 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 ZNF25P17030 456 aaPredicted RBP0.72□□□□□ -2.29
MDM2-208ENST00000393410 EIF3IQ13347 325 aaKnown RBP0.72□□□□□ -2.29
MDM2-208ENST00000393410 DCUN1D2Q6PH85 259 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 TEX261Q6UWH6 196 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 STX12Q86Y82 276 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 PRR15Q8IV56 129 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 LINC00471Q8N535 108 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 C12orf29Q8N999 325 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 NUP35Q8NFH5 326 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 YPEL2Q96QA6 119 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 MAP1LC3BQ9GZQ8 125 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 NHP2Q9NX24 153 aaKnown RBP0.72□□□□□ -2.29
MDM2-208ENST00000393410 NDUFAF1Q9Y375 327 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 U3KQ87 197 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 MYH13Q9UKX3 1938 aa0.72□□□□□ -2.29
MDM2-208ENST00000393410 TRAV10A0A0B4J240 114 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 TCRBV4S1A1TA0A5B7 111 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 C9orf170A2RU37 121 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 E7EUB6 86 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 AIPO00170 330 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 INE1O15225 51 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 CCL25O15444 150 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 CCL16O15467 120 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 HYPMO75409 117 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 PROSCO94903 275 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 ANGP03950 147 aaKnown RBP0.71□□□□□ -2.3
MDM2-208ENST00000393410 RPS3P23396 243 aaKnown RBP eCLIP0.71□□□□□ -2.3
MDM2-208ENST00000393410 DSCR4P56555 118 aaPredicted RBP0.71□□□□□ -2.3
MDM2-208ENST00000393410 TCTAP57738 103 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 RTL8BQ17RB0 113 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 EIF5AL1Q6IS14 154 aaKnown RBP0.71□□□□□ -2.3
MDM2-208ENST00000393410 FAM24BQ8N5W8 94 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 DYDC1Q8WWB3 177 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 RAB37Q96AX2 223 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 CHCHD1Q96BP2 118 aaKnown RBP0.71□□□□□ -2.3
MDM2-208ENST00000393410 ODF3Q96PU9 254 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 RTL8AQ9BWD3 113 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 MED11Q9P086 117 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 KLK9Q9UKQ9 250 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 NCAPD3P42695 1498 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 MYH6P13533 1939 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 CDK5RAP2Q96SN8 1893 aa0.71□□□□□ -2.3
MDM2-208ENST00000393410 YTHDC2Q9H6S0 1430 aaKnown RBP0.71□□□□□ -2.3
MDM2-208ENST00000393410 KIDINS220Q9ULH0 1771 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 A0A087WSZ3 146 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 H0YJX3 145 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 M0R2N4 97 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 GEMIN2O14893 280 aaKnown RBP0.7□□□□□ -2.3
MDM2-208ENST00000393410 RER1O15258 196 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 S100A11P31949 105 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 HBBP68871 147 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 RPS19BP1Q86WX3 136 aaKnown RBP0.7□□□□□ -2.3
MDM2-208ENST00000393410 OR5D16Q8NGK9 328 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 OR5D14Q8NGL3 314 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 OR4K15Q8NH41 348 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 PSMF1Q92530 271 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 MALSU1Q96EH3 234 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 LINC00052Q96N35 136 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 CACYBPQ9HB71 228 aaKnown RBP0.7□□□□□ -2.3
MDM2-208ENST00000393410 FAM135BQ49AJ0 1406 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 ATG2AQ2TAZ0 1938 aa0.7□□□□□ -2.3
MDM2-208ENST00000393410 MED12Q93074 2177 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 TCOF1Q13428 1488 aaKnown RBP0.69□□□□□ -2.3
MDM2-208ENST00000393410 IGKV2-40A0A087WW87 121 aaPredicted RBP0.69□□□□□ -2.3
MDM2-208ENST00000393410 TRBV6-7A0A0A0MS04 114 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 TRBV6-4A0A1B0GX49 114 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 M0R233 179 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 KLF7O75840 302 aaPredicted RBP0.69□□□□□ -2.3
MDM2-208ENST00000393410 IGKV2D-40P01614 121 aaPredicted RBP0.69□□□□□ -2.3
MDM2-208ENST00000393410 NBEAP1P0C6P0 100 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 POLR2HP52434 150 aaKnown RBP0.69□□□□□ -2.3
MDM2-208ENST00000393410 KLRD1Q13241 179 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 SCGB2B2Q4G0G5 96 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 ZCCHC23Q6ZST2 131 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 FAM19A2Q8N3H0 131 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 TEX47Q8TBZ9 253 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 THEM6Q8WUY1 208 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 HYLS1Q96M11 299 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 GPER1Q99527 375 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 LINC00467Q9BRT7 94 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 MRPL40Q9NQ50 206 aaKnown RBP0.69□□□□□ -2.3
MDM2-208ENST00000393410 RTL9Q8NET4 1388 aa0.69□□□□□ -2.3
MDM2-208ENST00000393410 HIST1H2BKO60814 126 aa0.68□□□□□ -2.3
MDM2-208ENST00000393410 PLXNA2O75051 1894 aa0.68□□□□□ -2.3
MDM2-208ENST00000393410 HIST1H2BJP06899 126 aa0.68□□□□□ -2.3
MDM2-208ENST00000393410 CDK6Q00534 326 aa0.68□□□□□ -2.3
MDM2-208ENST00000393410 PLCXD2Q0VAA5 305 aa0.68□□□□□ -2.3
MDM2-208ENST00000393410 Q5XG85 94 aa0.68□□□□□ -2.3
MDM2-208ENST00000393410 C4orf22Q6V702 233 aa0.68□□□□□ -2.3
MDM2-208ENST00000393410 LINC00269Q8N2A0 174 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms