RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 PMAIP1Q13794 54 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 TMEM78Q5T7P6 136 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 LINC00477Q96M19 166 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 AQP10Q96PS8 301 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 TMEM242Q9NWH2 141 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 IGHV3OR15-7A0A075B7D8 119 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 TRBV9A0A0B4J1U6 114 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 A0A1W2PPM0 123 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 IGHV4-59P01825 116 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 RBP4P02753 201 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 COX6CP09669 75 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 SCTP09683 121 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 ZNF688P0C7X2 276 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 BCL3P20749 454 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 GUSBP1Q15486 140 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 CDSNQ15517 529 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 C10orf91Q5T1B1 145 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 SPATA31B1PQ5VZV4 182 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 ZNF322Q6U7Q0 402 aaPredicted RBP6.57□□□□□ -1.36
LIMS1-203ENST00000393310 MRPL18Q9H0U6 180 aaKnown RBP6.57□□□□□ -1.36
LIMS1-203ENST00000393310 LINC00312Q9Y6C7 94 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 TP53BP1Q12888 1972 aaPredicted RBP6.57□□□□□ -1.36
LIMS1-203ENST00000393310 CRYM-AS1A6NIL9 109 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 PAGE4O60829 102 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 LMO4P61968 165 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 HERVK_113P63121 156 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 PAX8Q06710 450 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 DLX4Q92988 240 aaPredicted RBP6.57□□□□□ -1.36
LIMS1-203ENST00000393310 MLST8Q9BVC4 326 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 NPVFQ9HCQ7 196 aa6.57□□□□□ -1.36
LIMS1-203ENST00000393310 A8MZ25 164 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 GHRHP01286 108 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 FUT5Q11128 374 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 SRSF9Q13242 221 aaKnown RBP eCLIP6.56□□□□□ -1.36
LIMS1-203ENST00000393310 Q8TCH9 128 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 TMEM255BQ8WV15 326 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 VGLL1Q99990 258 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
LIMS1-203ENST00000393310 RCL1Q9Y2P8 373 aaKnown RBP6.56□□□□□ -1.36
LIMS1-203ENST00000393310 SERF1AO75920 110 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 LINC00694P0DN24 101 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 LEPP41159 167 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 FMODQ06828 376 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 HIST1H4GQ99525 98 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 FGF20Q9NP95 211 aaPredicted RBP6.56□□□□□ -1.36
LIMS1-203ENST00000393310 NUPR2A6NF83 97 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 CYSRT1A8MQ03 144 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 K7N7A8 449 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 CCL24O00175 119 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
LIMS1-203ENST00000393310 TPRX1Q8N7U7 411 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 GABARAPL1Q9H0R8 117 aa6.56□□□□□ -1.36
LIMS1-203ENST00000393310 TMSB15BA0A087X1C1 80 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 NBR2O15453 112 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 MPV17P39210 176 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 SRSF3P84103 164 aaKnown RBP6.55□□□□□ -1.36
LIMS1-203ENST00000393310 ATP5G2Q06055 141 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 ZAR1Q86SH2 424 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 NABP1Q96AH0 204 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 NHP2Q9NX24 153 aaKnown RBP6.55□□□□□ -1.36
LIMS1-203ENST00000393310 UQCRQO14949 82 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 DAD1P61803 113 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 WDR38Q5JTN6 314 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 Q6ZUT4 128 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 CBLL1Q75N03 491 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 TLN2Q9Y4G6 2542 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 FSTL3O95633 263 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 HLA-DQA1P01909 254 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 TRGV3P03979 118 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 DUTP33316 252 aaKnown RBP6.55□□□□□ -1.36
LIMS1-203ENST00000393310 ARL16Q0P5N6 197 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 SLC35E4Q6ICL7 350 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 NMES1Q9C002 83 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 KCNE3Q9Y6H6 103 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 ZNF292O60281 2723 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 LINC01619G3V211 115 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 RBM3P98179 157 aaKnown RBP6.55□□□□□ -1.36
LIMS1-203ENST00000393310 BVES-AS1Q5T3Y7 98 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 GATD1Q8NB37 220 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 SPACA5Q96QH8 159 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 KLHDC2Q9Y2U9 406 aa6.55□□□□□ -1.36
LIMS1-203ENST00000393310 CFAP46Q8IYW2 2715 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 MUC7Q8TAX7 377 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 IL1F10Q8WWZ1 152 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 COQ2Q96H96 371 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 TMEM133Q9H2Q1 129 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 CTLA4P16410 223 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 LINC00596Q86U02 117 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 AMN1Q8IY45 258 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 IDI2-AS1Q9NZ38 188 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 PXMP4Q9Y6I8 212 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 ETV2O00321 342 aaPredicted RBP6.54□□□□□ -1.36
LIMS1-203ENST00000393310 APCSP02743 223 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 PFN2P35080 140 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 PIP4P2Q8N4L2 257 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 C8orf31Q8N9H6 132 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 LINC01006Q8NI28 216 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 C16orf95Q9H693 158 aa6.54□□□□□ -1.36
LIMS1-203ENST00000393310 CCDC179H3BU77 68 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms