RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 PDZD11Q5EBL8 140 aa13.66□□□□□ -0.22
SHTN1-203ENST00000392901 IBA57Q5T440 356 aaKnown RBP13.66□□□□□ -0.22
SHTN1-203ENST00000392901 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
SHTN1-203ENST00000392901 PDZD2O15018 2839 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 MXRA5Q9NR99 2828 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 TCRAP04437 139 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 PRB4P10163 310 aaPredicted RBP13.65□□□□□ -0.22
SHTN1-203ENST00000392901 RPEL1Q2QD12 228 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 CMTM2Q8TAZ6 248 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 ATG101Q9BSB4 218 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 GPR61Q9BZJ8 451 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 KLF12Q9Y4X4 402 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 PCP4L1A6NKN8 68 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 H3BUA1 57 aa13.65□□□□□ -0.22
SHTN1-203ENST00000392901 ZNF207O43670 478 aaKnown RBP13.64□□□□□ -0.23
SHTN1-203ENST00000392901 TRBV12-3P01733 135 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 FRMD6-AS1P0C7T7 363 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 RPL7P18124 248 aaKnown RBP13.64□□□□□ -0.23
SHTN1-203ENST00000392901 RELQ04864 619 aaPredicted RBP13.64□□□□□ -0.23
SHTN1-203ENST00000392901 DUX5Q96PT3 197 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 SERTAD4Q9NUC0 356 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 GCN1Q92616 2671 aaKnown RBP13.64□□□□□ -0.23
SHTN1-203ENST00000392901 IGHV3OR16-13A0A075B7E8 117 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 IGHV3-74A0A0B4J1X5 117 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 IGHV3-66A0A0C4DH42 116 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 CA1P00915 261 aaPredicted RBP13.64□□□□□ -0.23
SHTN1-203ENST00000392901 IGLV1-40P01703 118 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 ARL3P36405 182 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 SIGLEC15Q6ZMC9 328 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 USMG5Q96IX5 58 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 BTF3L4Q96K17 158 aa13.64□□□□□ -0.23
SHTN1-203ENST00000392901 ITPR2Q14571 2701 aa13.63□□□□□ -0.23
SHTN1-203ENST00000392901 TLN2Q9Y4G6 2542 aa13.63□□□□□ -0.23
SHTN1-203ENST00000392901 S100A9P06702 114 aaKnown RBP13.63□□□□□ -0.23
SHTN1-203ENST00000392901 RAB9AP51151 201 aa13.63□□□□□ -0.23
SHTN1-203ENST00000392901 PRR27Q6MZM9 219 aa13.63□□□□□ -0.23
SHTN1-203ENST00000392901 TRAPPC1Q9Y5R8 145 aa13.63□□□□□ -0.23
SHTN1-203ENST00000392901 IGHV3-49A0A0A0MS15 119 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 TRAV8-1A0A0A6YYK1 113 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 CLPSL1A2RUU4 121 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 BRI3O95415 125 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 S100A7P31151 101 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 TCL1AP56279 114 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 CFHR3Q02985 330 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 ZNF705GA8MUZ8 300 aaPredicted RBP13.62□□□□□ -0.23
SHTN1-203ENST00000392901 SPINK4O60575 86 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 GOLT1AQ6ZVE7 132 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 ATP6V0BQ99437 205 aa13.62□□□□□ -0.23
SHTN1-203ENST00000392901 BUB3O43684 328 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 APOHP02749 345 aaPredicted RBP13.61□□□□□ -0.23
SHTN1-203ENST00000392901 C10orf99Q6UWK7 81 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 Q71RC1 249 aaPredicted RBP13.61□□□□□ -0.23
SHTN1-203ENST00000392901 LYPD1Q8N2G4 141 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 NUDT10Q8NFP7 164 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 OR4X2Q8NGF9 303 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 NUDT11Q96G61 164 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 FMC1Q96HJ9 113 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 GPR82Q96P67 336 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 MLST8Q9BVC4 326 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 SMAD5-AS1Q9Y6J3 95 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 TRAV9-1A0A075B6T8 112 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 XKRY2A2RUG3 117 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 M0R3E3 92 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 SLC35B1P78383 322 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 METTL26Q96S19 204 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 FOXC2Q99958 501 aa13.61□□□□□ -0.23
SHTN1-203ENST00000392901 FLNAP21333 2647 aaKnown RBP13.6□□□□□ -0.23
SHTN1-203ENST00000392901 UNC79Q9P2D8 2635 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 A0A0G2JLM5 398 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 LTAP01374 205 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 CBLN1P23435 193 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 S100A2P29034 98 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 PDE6HQ13956 83 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 LINC00322Q6ZN03 302 aaPredicted RBP13.6□□□□□ -0.23
SHTN1-203ENST00000392901 TMEM183AQ8IXX5 376 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 SIGLECL1Q8N7X8 197 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 PRSS22Q9GZN4 317 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 AAMDCQ9H7C9 122 aa13.6□□□□□ -0.23
SHTN1-203ENST00000392901 IGLV2-11P01706 119 aa13.59□□□□□ -0.23
SHTN1-203ENST00000392901 COA6Q5JTJ3 125 aaKnown RBP13.59□□□□□ -0.23
SHTN1-203ENST00000392901 FAM231DQ6ZW35 169 aa13.59□□□□□ -0.23
SHTN1-203ENST00000392901 PRDM13Q9H4Q3 707 aa13.59□□□□□ -0.23
SHTN1-203ENST00000392901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.59□□□□□ -0.23
SHTN1-203ENST00000392901 SMIM27A0A1W2PRY6 76 aa13.59□□□□□ -0.23
SHTN1-203ENST00000392901 GATCO43716 136 aaKnown RBP13.59□□□□□ -0.23
SHTN1-203ENST00000392901 OR10D4PQ8NGN7 298 aa13.59□□□□□ -0.23
SHTN1-203ENST00000392901 NPFFR1Q9GZQ6 430 aa13.59□□□□□ -0.23
SHTN1-203ENST00000392901 ZNF785A8K8V0 405 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 IGHG4P01861 327 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 FABP4P15090 132 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 IGFL4Q6B9Z1 124 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 UNQ9165/PRO28630Q6UXU0 137 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 ASCL2Q99929 193 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 ZNF580Q9UK33 172 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 PSMB8P28062 276 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 PSG9Q00887 426 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 PRNTQ86SH4 94 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 Q86TA4 180 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 HIST1H2BLQ99880 126 aa13.58□□□□□ -0.24
SHTN1-203ENST00000392901 NIT2Q9NQR4 276 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms