RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 LCN12Q6JVE5 192 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 IGHV2OR16-5A0A0B4J2B6 119 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 DSCAML1Q8TD84 2053 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 NAV3Q8IVL0 2385 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
CCDC50-201ENST00000392455 ATOX1O00244 68 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 RAMP1O60894 148 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 FAM201AQ5SY85 155 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 HIST3H2BBQ8N257 126 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 ZNF883P0CG24 379 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 C15orf32Q32M92 178 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 GATA3P23771 443 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 PPP1R32Q7Z5V6 425 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 NABP1Q96AH0 204 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 A0A0G2JK05 382 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 CECR9P0C854 216 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 GAGE7O76087 117 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 GAGE12FP0CL80 117 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 GAGE12GP0CL81 117 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 GAGE12IP0CL82 117 aa12.15□□□□□ -0.46
CCDC50-201ENST00000392455 TMEM158Q8WZ71 300 aa12.15□□□□□ -0.47
CCDC50-201ENST00000392455 IGHV3OR16-8A0A075B7F1 116 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 CLPSL1A2RUU4 121 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 M0R1W7 72 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 IL15RAQ13261 267 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 OCC1Q8TAD7 63 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 SPANXB1Q9NS25 103 aaPredicted RBP12.14□□□□□ -0.47
CCDC50-201ENST00000392455 MESP1Q9BRJ9 268 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 BMPERQ8N8U9 685 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
CCDC50-201ENST00000392455 PIN1P1O15428 100 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 HERVK_113P63121 156 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 SPSB2Q99619 263 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 C9orf118A6NHY6 69 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 CEACAM1P13688 526 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 GNG5P63218 68 aa12.14□□□□□ -0.47
CCDC50-201ENST00000392455 SHISA9B4DS77 424 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 PRO1854Q9UHT4 67 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 CHCHD2Q9Y6H1 151 aaPredicted RBP12.13□□□□□ -0.47
CCDC50-201ENST00000392455 CTHRC1Q96CG8 243 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 COL4A1P02462 1669 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 PRB3Q04118 309 aaPredicted RBP12.13□□□□□ -0.47
CCDC50-201ENST00000392455 SPXQ9BT56 116 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 NDUFB8O95169 186 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 CGB7P0DN87 165 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 PRR14LQ5THK1 2151 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 LRRC37AA6NMS7 1700 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 A0A1B0GWJ7 208 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 BAALCQ8WXS3 180 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 SCRT2Q9NQ03 307 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
CCDC50-201ENST00000392455 C9JQL5 133 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 J3KT08 172 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 A0A087X0K7 114 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 SVIPQ8NHG7 77 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 MCRIP2Q9BUT9 160 aaKnown RBP12.12□□□□□ -0.47
CCDC50-201ENST00000392455 IGHV3-11P01762 117 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 CGB3P0DN86 165 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 RTBDNQ9BSG5 229 aaPredicted RBP12.12□□□□□ -0.47
CCDC50-201ENST00000392455 ORMDL1Q9P0S3 153 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 C4orf48Q5BLP8 95 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 PYY3Q5JQD4 70 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 C8orf31Q8N9H6 132 aa12.12□□□□□ -0.47
CCDC50-201ENST00000392455 TRAV13-1A0A0B4J241 112 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 CSRP2Q16527 193 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 FAM216BQ8N7L0 139 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 THBDP07204 575 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 CELA3BP08861 270 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 C1QL2Q7Z5L3 287 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 DAZ1Q9NQZ3 744 aaKnown RBP12.11□□□□□ -0.47
CCDC50-201ENST00000392455 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 TMEM243Q9BU79 118 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 SH2D6Q7Z4S9 175 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 GREM1O60565 184 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 IGHV1-2P23083 117 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 SYNJ2BPP57105 145 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 NUP35Q8NFH5 326 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 ATP5G1P05496 136 aa12.11□□□□□ -0.47
CCDC50-201ENST00000392455 LINC01590Q5TEZ4 76 aa12.1□□□□□ -0.47
CCDC50-201ENST00000392455 A0A0A6YYD4 124 aa12.1□□□□□ -0.47
CCDC50-201ENST00000392455 A0A1B0GX51 115 aa12.1□□□□□ -0.47
CCDC50-201ENST00000392455 UBE2BP63146 152 aa12.1□□□□□ -0.47
CCDC50-201ENST00000392455 KLHDC3Q9BQ90 382 aa12.1□□□□□ -0.47
CCDC50-201ENST00000392455 GAS1P54826 345 aa12.1□□□□□ -0.47
CCDC50-201ENST00000392455 AMN1Q8IY45 258 aa12.1□□□□□ -0.47
CCDC50-201ENST00000392455 SIVA1O15304 175 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 DAD1P61803 113 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 COL4A5P29400 1685 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 PMS2P5A8MQ11 134 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 LYZL1Q6UWQ5 148 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 LOC105371267A0A1B0GV96 52 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 CDKN1AP38936 164 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 WFDC9Q8NEX5 89 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 FGF6P10767 208 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 HERV-K104P63124 156 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 LTBRP36941 435 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 PRR15LQ9BU68 103 aa12.09□□□□□ -0.47
CCDC50-201ENST00000392455 C1orf122Q6ZSJ8 110 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms