RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 PTPN13Q12923 2485 aa14.12□□□□□ -0.15
ACTN4-202ENST00000390009 SPINK4O60575 86 aa14.12□□□□□ -0.15
ACTN4-202ENST00000390009 IGLV2-11P01706 119 aa14.12□□□□□ -0.15
ACTN4-202ENST00000390009 IER3P46695 156 aa14.12□□□□□ -0.15
ACTN4-202ENST00000390009 RPL19P84098 196 aaKnown RBP14.12□□□□□ -0.15
ACTN4-202ENST00000390009 ZFAND3Q9H8U3 227 aa14.12□□□□□ -0.15
ACTN4-202ENST00000390009 IGF1P05019 195 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 SLC35B1P78383 322 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 MAPK1IP1LQ8NDC0 245 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 GRAMD2BQ96HH9 432 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 USP9YO00507 2555 aaPredicted RBP14.11□□□□□ -0.15
ACTN4-202ENST00000390009 M0QZK8 103 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 IGHG2P01859 326 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 S100A7P31151 101 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 ATP5G2Q06055 141 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 HIST1H2BLQ99880 126 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 PRO1933Q9H354 126 aa14.11□□□□□ -0.15
ACTN4-202ENST00000390009 FAM223BA6NKX1 122 aa14.1□□□□□ -0.15
ACTN4-202ENST00000390009 LINC00322Q6ZN03 302 aaPredicted RBP14.1□□□□□ -0.15
ACTN4-202ENST00000390009 PRNTQ86SH4 94 aa14.1□□□□□ -0.15
ACTN4-202ENST00000390009 FAM223AQ8IWN6 122 aa14.1□□□□□ -0.15
ACTN4-202ENST00000390009 OR5R1Q8NH85 324 aa14.1□□□□□ -0.15
ACTN4-202ENST00000390009 MRPL18Q9H0U6 180 aaKnown RBP14.1□□□□□ -0.15
ACTN4-202ENST00000390009 AAMDCQ9H7C9 122 aa14.1□□□□□ -0.15
ACTN4-202ENST00000390009 CR1P17927 2039 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 SNURFLB1AK76 121 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 M0R3E3 92 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 TGFAP01135 160 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 TMEM75Q8N9X5 138 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 GNB1LQ9BYB4 327 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 TRBV6-1A0A0K0K1D8 114 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 IZUMO1RA6ND01 250 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 DIRC3C9JPN6 131 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 RNF223E7ERA6 249 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 J3QLI3 93 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 K7EQM0 130 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 TRGV3P03979 118 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 LOXL1Q08397 574 aaPredicted RBP14.09□□□□□ -0.15
ACTN4-202ENST00000390009 ZNF492Q9P255 531 aa14.09□□□□□ -0.15
ACTN4-202ENST00000390009 BLCAPP62952 87 aa14.08□□□□□ -0.16
ACTN4-202ENST00000390009 PSG9Q00887 426 aa14.08□□□□□ -0.16
ACTN4-202ENST00000390009 MRPL54Q6P161 138 aaKnown RBP14.08□□□□□ -0.16
ACTN4-202ENST00000390009 BEX4Q9NWD9 120 aaPredicted RBP14.08□□□□□ -0.16
ACTN4-202ENST00000390009 SMAD5-AS1Q9Y6J3 95 aa14.08□□□□□ -0.16
ACTN4-202ENST00000390009 C19orf71A6NCJ1 209 aa14.08□□□□□ -0.16
ACTN4-202ENST00000390009 PRB4P10163 310 aaPredicted RBP14.08□□□□□ -0.16
ACTN4-202ENST00000390009 DEFB113Q30KQ7 82 aa14.08□□□□□ -0.16
ACTN4-202ENST00000390009 CIARTQ8N365 385 aaPredicted RBP14.08□□□□□ -0.16
ACTN4-202ENST00000390009 TSKUQ8WUA8 353 aa14.08□□□□□ -0.16
ACTN4-202ENST00000390009 NOL4LQ96MY1 436 aaPredicted RBP14.08□□□□□ -0.16
ACTN4-202ENST00000390009 ATP6V0BQ99437 205 aa14.08□□□□□ -0.16
ACTN4-202ENST00000390009 PRSS22Q9GZN4 317 aa14.08□□□□□ -0.16
ACTN4-202ENST00000390009 PPIFP30405 207 aaKnown RBP14.07□□□□□ -0.16
ACTN4-202ENST00000390009 PSG3Q16557 428 aa14.07□□□□□ -0.16
ACTN4-202ENST00000390009 WDR73Q6P4I2 378 aa14.07□□□□□ -0.16
ACTN4-202ENST00000390009 RPP21Q9H633 154 aaKnown RBP14.07□□□□□ -0.16
ACTN4-202ENST00000390009 NAT8BQ9UHF3 227 aa14.07□□□□□ -0.16
ACTN4-202ENST00000390009 CLPSL1A2RUU4 121 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 BUB3O43684 328 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 P01737 135 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 RAB9AP51151 201 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 TPPP2P59282 170 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 RELQ04864 619 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-202ENST00000390009 COX19Q49B96 90 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 TMEM136Q6ZRR5 245 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 Q6ZS46 218 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 Q71RC1 249 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-202ENST00000390009 NUP35Q8NFH5 326 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 NEU1Q99519 415 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 ABCA12Q86UK0 2595 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 MT-ND6P03923 174 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 DEFB112Q30KQ8 113 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 DAZAP1Q96EP5 407 aaKnown RBP14.06□□□□□ -0.16
ACTN4-202ENST00000390009 PSG8Q9UQ74 426 aa14.06□□□□□ -0.16
ACTN4-202ENST00000390009 HIGD1CA8MV81 97 aa14.05□□□□□ -0.16
ACTN4-202ENST00000390009 CSN1S1P47710 185 aa14.05□□□□□ -0.16
ACTN4-202ENST00000390009 JOSD1Q15040 202 aaPredicted RBP14.05□□□□□ -0.16
ACTN4-202ENST00000390009 LRRC75A-AS1Q8N1F1 130 aa14.05□□□□□ -0.16
ACTN4-202ENST00000390009 ZFP30Q9Y2G7 519 aa14.05□□□□□ -0.16
ACTN4-202ENST00000390009 BRI3O95415 125 aa14.05□□□□□ -0.16
ACTN4-202ENST00000390009 CT83Q5H943 113 aa14.05□□□□□ -0.16
ACTN4-202ENST00000390009 Q5PR19 223 aa14.05□□□□□ -0.16
ACTN4-202ENST00000390009 H3BUA1 57 aa14.04□□□□□ -0.16
ACTN4-202ENST00000390009 ZNF253O75346 499 aa14.04□□□□□ -0.16
ACTN4-202ENST00000390009 AMBPP02760 352 aa14.04□□□□□ -0.16
ACTN4-202ENST00000390009 IGHV4-31P0DP07 118 aa14.04□□□□□ -0.16
ACTN4-202ENST00000390009 RAB4BP61018 213 aa14.04□□□□□ -0.16
ACTN4-202ENST00000390009 LBHQ53QV2 105 aaPredicted RBP14.04□□□□□ -0.16
ACTN4-202ENST00000390009 ASCL2Q99929 193 aa14.04□□□□□ -0.16
ACTN4-202ENST00000390009 ZNF331Q9NQX6 463 aaPredicted RBP14.04□□□□□ -0.16
ACTN4-202ENST00000390009 SERTM2A0A1B0GWG4 89 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 GRIFINA4D1Z8 144 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 A8MWL6 223 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 IGHV4-59P01825 116 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 GZMBP10144 247 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 GBGT1Q8N5D6 347 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 ZC2HC1AQ96GY0 325 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 METTL26Q96S19 204 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 C2orf88Q9BSF0 95 aa14.03□□□□□ -0.16
ACTN4-202ENST00000390009 ZANQ9Y493 2812 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms