RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 CLPSL1A2RUU4 121 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 CLPSP04118 112 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 ADCYAP1P18509 176 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 GATA4P43694 442 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 PAX9P55771 341 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 SS18L2Q9UHA2 77 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 CFHR1Q03591 330 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 Q0VFX4 171 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 CYYR1Q96J86 154 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 C5orf64Q2M2E5 130 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 Q86TA4 180 aa12.58□□□□□ -0.39
ALK-201ENST00000389048 DNAJC30Q96LL9 226 aa12.58□□□□□ -0.39
ALK-201ENST00000389048 CGB7P0DN87 165 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 SIGLEC9Q9Y336 463 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 IGHV4-4A0A075B6R2 117 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 C15orf62A8K5M9 175 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 LY6G5BQ8NDX9 201 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 GAGE7O76087 117 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 GAGE12FP0CL80 117 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 GAGE12GP0CL81 117 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 GAGE12IP0CL82 117 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 FAM166AQ6J272 317 aa12.58□□□□□ -0.4
ALK-201ENST00000389048 NYNRINQ9P2P1 1898 aaKnown RBP12.58□□□□□ -0.4
ALK-201ENST00000389048 CD5LO43866 347 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 IL18BPO95998 194 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 BPESC1Q9GZL8 116 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 PSME4Q14997 1843 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 IGKV1D-17A0A075B6S4 117 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 hADV29S1A0JD25 119 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 SOCS3O14543 225 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 SAA4P35542 130 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 NKAPP1Q8N9T2 125 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 THAP8Q8NA92 274 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 SRRM5B3KS81 715 aa12.57□□□□□ -0.4
ALK-201ENST00000389048 EFNA4P52798 201 aa12.56□□□□□ -0.4
ALK-201ENST00000389048 SCRT2Q9NQ03 307 aa12.56□□□□□ -0.4
ALK-201ENST00000389048 A8MWP6 167 aa12.56□□□□□ -0.4
ALK-201ENST00000389048 E9PLN8 166 aa12.56□□□□□ -0.4
ALK-201ENST00000389048 C9orf139Q6ZV77 190 aa12.56□□□□□ -0.4
ALK-201ENST00000389048 MBD3L4A6NDZ8 208 aaPredicted RBP12.56□□□□□ -0.4
ALK-201ENST00000389048 MBD3L3A6NE82 208 aaPredicted RBP12.56□□□□□ -0.4
ALK-201ENST00000389048 MBD3L5A6NJ08 208 aaPredicted RBP12.56□□□□□ -0.4
ALK-201ENST00000389048 RNF223E7ERA6 249 aa12.56□□□□□ -0.4
ALK-201ENST00000389048 MBD3L2Q8NHZ7 208 aaPredicted RBP12.56□□□□□ -0.4
ALK-201ENST00000389048 CACNA1IQ9P0X4 2223 aa12.55□□□□□ -0.4
ALK-201ENST00000389048 AZU1P20160 251 aa12.55□□□□□ -0.4
ALK-201ENST00000389048 Q6ZRM9 215 aa12.55□□□□□ -0.4
ALK-201ENST00000389048 PNRC2Q9NPJ4 139 aaKnown RBP12.55□□□□□ -0.4
ALK-201ENST00000389048 CEACAM8P31997 349 aaPredicted RBP12.55□□□□□ -0.4
ALK-201ENST00000389048 C5orf47Q569G3 176 aa12.55□□□□□ -0.4
ALK-201ENST00000389048 COL11A2P13942 1736 aaPredicted RBP12.55□□□□□ -0.4
ALK-201ENST00000389048 Q6P435 159 aa12.55□□□□□ -0.4
ALK-201ENST00000389048 RBBP6Q7Z6E9 1792 aaKnown RBP12.55□□□□□ -0.4
ALK-201ENST00000389048 LHFPL1Q86WI0 220 aa12.55□□□□□ -0.4
ALK-201ENST00000389048 MAP1BP46821 2468 aaKnown RBP12.54□□□□□ -0.4
ALK-201ENST00000389048 CRLF1O75462 422 aa12.54□□□□□ -0.4
ALK-201ENST00000389048 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
ALK-201ENST00000389048 LINC01549A6NIU2 74 aa12.54□□□□□ -0.4
ALK-201ENST00000389048 IFITM1P13164 125 aa12.54□□□□□ -0.4
ALK-201ENST00000389048 GAS1P54826 345 aa12.54□□□□□ -0.4
ALK-201ENST00000389048 CACNA1DQ01668 2161 aa12.54□□□□□ -0.4
ALK-201ENST00000389048 TRACP01848 142 aa12.54□□□□□ -0.4
ALK-201ENST00000389048 FAM110DQ8TAY7 271 aaPredicted RBP12.54□□□□□ -0.4
ALK-201ENST00000389048 ATP6V0E1O15342 81 aa12.54□□□□□ -0.4
ALK-201ENST00000389048 RNASE2P10153 161 aaKnown RBP12.54□□□□□ -0.4
ALK-201ENST00000389048 G3V318 75 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 TRPT1Q86TN4 253 aaKnown RBP12.53□□□□□ -0.4
ALK-201ENST00000389048 FGF6P10767 208 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 LHBP01229 141 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 DAD1P61803 113 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 TCTEX1D4Q5JR98 221 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 SPRY2O43597 315 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 IGHG3P01860 377 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 DUX4L9Q6RFH8 374 aaPredicted RBP12.53□□□□□ -0.4
ALK-201ENST00000389048 C3orf56Q8N813 242 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 IGFBPL1Q8WX77 278 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 LOC102723996A0A087X1L8 192 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 ETDBQ3ZM63 59 aa12.53□□□□□ -0.4
ALK-201ENST00000389048 C9JQL5 133 aa12.52□□□□□ -0.4
ALK-201ENST00000389048 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.52□□□□□ -0.4
ALK-201ENST00000389048 IGKV1-39P01597 117 aa12.52□□□□□ -0.4
ALK-201ENST00000389048 IGKV1D-39P04432 117 aa12.52□□□□□ -0.4
ALK-201ENST00000389048 OVOL2Q9BRP0 275 aa12.52□□□□□ -0.4
ALK-201ENST00000389048 TEX36Q5VZQ5 186 aa12.52□□□□□ -0.4
ALK-201ENST00000389048 DTX1Q86Y01 620 aa12.52□□□□□ -0.4
ALK-201ENST00000389048 FER1L5A0AVI2 2057 aa12.52□□□□□ -0.4
ALK-201ENST00000389048 IGLV3-12A0A075B6K2 115 aa12.52□□□□□ -0.41
ALK-201ENST00000389048 PRR30Q53SZ7 412 aaPredicted RBP12.52□□□□□ -0.41
ALK-201ENST00000389048 Q6ZVH6 145 aa12.52□□□□□ -0.41
ALK-201ENST00000389048 B4DSR2 109 aa12.51□□□□□ -0.41
ALK-201ENST00000389048 MMP23AO75900 390 aa12.51□□□□□ -0.41
ALK-201ENST00000389048 FAM223BA6NKX1 122 aa12.51□□□□□ -0.41
ALK-201ENST00000389048 FAM223AQ8IWN6 122 aa12.51□□□□□ -0.41
ALK-201ENST00000389048 FBLN5Q9UBX5 448 aa12.51□□□□□ -0.41
ALK-201ENST00000389048 A0A1W2PPI3 338 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms