RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 CST9LQ9H4G1 147 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 JPT2Q9H910 190 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 SMPXQ9UHP9 88 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 BUB1B-PAK6H3BSN5 160 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 EFNA2O43921 213 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 LINC00158P58513 81 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 MBD3L1Q8WWY6 194 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 M0R2P5 195 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 WDR83OSQ9Y284 106 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 TRAV8-2A0A0B4J237 113 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 TRBV6-6A0A0A6YYG2 114 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 UNQ6494/PRO21346Q6UXR6 183 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 NMSQ5H8A3 153 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 MS4A6AQ9H2W1 248 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 ERCC8Q13216 396 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 SFTA2Q6UW10 78 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 H3BUT2 72 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 NCR2O95944 276 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 PSPNO60542 156 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 SLC25A16P16260 332 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 SPATA31B1PQ5VZV4 182 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 RASL11AQ6T310 242 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 Q8TAT8 98 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 ZNF138P52744 262 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 C9orf139Q6ZV77 190 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 C1QTNF4Q9BXJ3 329 aa10.07□□□□□ -0.8
KCNQ3-201ENST00000388996 PRB4P10163 310 aaPredicted RBP10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 Q6P435 159 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 LAMTOR2Q9Y2Q5 125 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 SELENOKQ9Y6D0 94 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 RAI1Q7Z5J4 1906 aaPredicted RBP10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 D6R8Y8 96 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 MAJINQ3KP22 176 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 IGKV1-5P01602 117 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 C17orf82Q86X59 251 aaPredicted RBP10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 TRAV3A0A0B4J244 114 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 NDPQ00604 133 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 ZNF362Q5T0B9 420 aaPredicted RBP10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 DERL1Q9BUN8 251 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 AGMATQ9BSE5 352 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 TEX43Q6ZNM6 134 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 SIGLEC9Q9Y336 463 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 TNFSF13O75888 250 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
KCNQ3-201ENST00000388996 FCN3O75636 299 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 FOXG1P55316 489 aaPredicted RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 HOXA3O43365 443 aaPredicted RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 TCRAP04437 139 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 TMEM8BA6NDV4 472 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 MBD3L4A6NDZ8 208 aaPredicted RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 MBD3L3A6NE82 208 aaPredicted RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 MBD3L5A6NJ08 208 aaPredicted RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 SEC11AP67812 179 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 MBD3L2Q8NHZ7 208 aaPredicted RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 DAZ1Q9NQZ3 744 aaKnown RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 TMEM242Q9NWH2 141 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 HSD52Q0P140 79 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 KLF17Q5JT82 389 aaPredicted RBP10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 LCN12Q6JVE5 192 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 DPH3P1Q9H4G8 78 aa10.05□□□□□ -0.8
KCNQ3-201ENST00000388996 IGKV1D-17A0A075B6S4 117 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 F8WEM9 126 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 FGF16O43320 207 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 LHFPL1Q86WI0 220 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 SH2D1AO60880 128 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 LCNL1Q6ZST4 164 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 FAM90A2PQ658T7 463 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 B3GALT5-AS1P59052 145 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 PSCAO43653 123 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 LINC00473A8K010 186 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 PAX4O43316 350 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 SAA4P35542 130 aa10.04□□□□□ -0.8
KCNQ3-201ENST00000388996 TOMM40O96008 361 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 FXYD7P58549 80 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 SRSF8Q9BRL6 282 aaKnown RBP10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 NDUFAF3Q9BU61 184 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 ZNF474Q6S9Z5 364 aaPredicted RBP10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 FNDC4Q9H6D8 234 aaPredicted RBP10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 LYZL1Q6UWQ5 148 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 LEPROTO15243 131 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 C14orf178Q8N769 122 aaPredicted RBP10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 OVOL2Q9BRP0 275 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 A0A0U1RRA0 63 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 C1orf159Q96HA4 380 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 SRSF6Q13247 344 aaKnown RBP10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 TMEM249Q2WGJ8 235 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 TDGF1P3P51864 188 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms