RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 COX7A2P2O60397 106 aa14.38□□□□□ -0.11
GTF3A-201ENST00000381140 PLP1P60201 277 aa14.38□□□□□ -0.11
GTF3A-201ENST00000381140 ZNF726P1Q15940 193 aa14.38□□□□□ -0.11
GTF3A-201ENST00000381140 MBD3L1Q8WWY6 194 aa14.38□□□□□ -0.11
GTF3A-201ENST00000381140 SLC25A39Q9BZJ4 359 aaPredicted RBP14.38□□□□□ -0.11
GTF3A-201ENST00000381140 ACTR3CQ9C0K3 210 aaPredicted RBP14.38□□□□□ -0.11
GTF3A-201ENST00000381140 CTXND1A0A1B0GTU2 59 aa14.37□□□□□ -0.11
GTF3A-201ENST00000381140 H3BRN7 92 aa14.37□□□□□ -0.11
GTF3A-201ENST00000381140 H2AFB1P0C5Y9 115 aa14.37□□□□□ -0.11
GTF3A-201ENST00000381140 GCSAMLQ5JQS6 135 aa14.37□□□□□ -0.11
GTF3A-201ENST00000381140 PATE2Q6UY27 113 aa14.37□□□□□ -0.11
GTF3A-201ENST00000381140 LINC00322Q6ZN03 302 aaPredicted RBP14.37□□□□□ -0.11
GTF3A-201ENST00000381140 FAM110AQ9BQ89 295 aa14.37□□□□□ -0.11
GTF3A-201ENST00000381140 SHANK2-AS3Q9BTD1 123 aa14.37□□□□□ -0.11
GTF3A-201ENST00000381140 ZMAT4Q9H898 229 aa14.37□□□□□ -0.11
GTF3A-201ENST00000381140 TRAV1-1A0A0B4J248 108 aa14.36□□□□□ -0.11
GTF3A-201ENST00000381140 GALR1P47211 349 aa14.36□□□□□ -0.11
GTF3A-201ENST00000381140 CDC34P49427 236 aaPredicted RBP14.36□□□□□ -0.11
GTF3A-201ENST00000381140 PSMG4Q5JS54 123 aa14.36□□□□□ -0.11
GTF3A-201ENST00000381140 FAM122CQ6P4D5 195 aa14.36□□□□□ -0.11
GTF3A-201ENST00000381140 OR1L4Q8NGR5 311 aa14.36□□□□□ -0.11
GTF3A-201ENST00000381140 GATAD1Q8WUU5 269 aa14.36□□□□□ -0.11
GTF3A-201ENST00000381140 PFDN5Q99471 154 aa14.36□□□□□ -0.11
GTF3A-201ENST00000381140 U3KQK5 164 aa14.36□□□□□ -0.11
GTF3A-201ENST00000381140 HBE1P02100 147 aa14.35□□□□□ -0.11
GTF3A-201ENST00000381140 S100A7AQ86SG5 101 aa14.35□□□□□ -0.11
GTF3A-201ENST00000381140 RETNQ9HD89 108 aa14.35□□□□□ -0.11
GTF3A-201ENST00000381140 ELOA3CA0A087WX78 387 aaPredicted RBP14.34□□□□□ -0.11
GTF3A-201ENST00000381140 SNRPD3P62318 126 aaKnown RBP14.34□□□□□ -0.11
GTF3A-201ENST00000381140 RHOBP62745 196 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 C10orf113Q5VZT2 155 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 SSX7Q7RTT5 188 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 LINC00305Q7Z4B0 112 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 RAB24Q969Q5 203 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 RCHY1Q96PM5 261 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 TM2D3Q9BRN9 247 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 MRPL32Q9BYC8 188 aaKnown RBP14.34□□□□□ -0.11
GTF3A-201ENST00000381140 HRH4Q9H3N8 390 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 A0A1W2PPV4 95 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 MAP1LC3B2A6NCE7 125 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 KNCNA6PVL3 124 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 TEX46H3BTG2 121 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 ATF4P18848 351 aaPredicted RBP14.34□□□□□ -0.11
GTF3A-201ENST00000381140 SFT2D1Q8WV19 159 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 TMEM37Q8WXS4 190 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 LINC00052Q96N35 136 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 GPR82Q96P67 336 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 SPATA25Q9BR10 227 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 MAP1LC3BQ9GZQ8 125 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 DNAJC4Q9NNZ3 241 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 FUT9Q9Y231 359 aa14.34□□□□□ -0.11
GTF3A-201ENST00000381140 APOC4P55056 127 aa14.33□□□□□ -0.12
GTF3A-201ENST00000381140 SEPSECSQ9HD40 501 aaKnown RBP14.33□□□□□ -0.12
GTF3A-201ENST00000381140 STAG3L2P0CL84 134 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 STAG3L3P0CL85 134 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 RPL7P18124 248 aaKnown RBP14.32□□□□□ -0.12
GTF3A-201ENST00000381140 ID1P41134 155 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 ACTL10Q5JWF8 245 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 FAM78BQ5VT40 261 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 LCN15Q6UWW0 184 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 COMMD7Q86VX2 200 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 STHQ8IWL8 128 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 C16orf92Q96LL3 132 aa14.32□□□□□ -0.12
GTF3A-201ENST00000381140 MORN5Q5VZ52 161 aa14.31□□□□□ -0.12
GTF3A-201ENST00000381140 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.31□□□□□ -0.12
GTF3A-201ENST00000381140 SNRPCP09234 159 aaKnown RBP14.3□□□□□ -0.12
GTF3A-201ENST00000381140 MEOX2P50222 304 aa14.3□□□□□ -0.12
GTF3A-201ENST00000381140 SPATA31B1PQ5VZV4 182 aa14.3□□□□□ -0.12
GTF3A-201ENST00000381140 MIR17HGQ75NE6 70 aa14.3□□□□□ -0.12
GTF3A-201ENST00000381140 RNF24Q9Y225 148 aa14.3□□□□□ -0.12
GTF3A-201ENST00000381140 NBEAL2Q6ZNJ1 2754 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 TENM3Q9P273 2699 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 TRAV5A0A0B4J249 113 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 RAB19A4D1S5 217 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 SOCS3O14543 225 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 PSMB3P49720 205 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 TAS2R45P59539 299 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 DEFB1P60022 68 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 PMS2P11Q13670 270 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 SLC7A5P1Q8MH63 180 aa14.29□□□□□ -0.12
GTF3A-201ENST00000381140 EIF4E3Q8N5X7 224 aaKnown RBP14.29□□□□□ -0.12
GTF3A-201ENST00000381140 ISLRO14498 428 aa14.28□□□□□ -0.12
GTF3A-201ENST00000381140 HMGB3O15347 200 aaKnown RBP14.28□□□□□ -0.12
GTF3A-201ENST00000381140 CXorf1O96002 111 aa14.28□□□□□ -0.12
GTF3A-201ENST00000381140 FGF8P55075 233 aaPredicted RBP14.28□□□□□ -0.12
GTF3A-201ENST00000381140 CCL20P78556 96 aa14.28□□□□□ -0.12
GTF3A-201ENST00000381140 DEFB135Q30KP9 77 aa14.28□□□□□ -0.12
GTF3A-201ENST00000381140 KHDC3LQ587J8 217 aa14.28□□□□□ -0.12
GTF3A-201ENST00000381140 IGFL4Q6B9Z1 124 aa14.28□□□□□ -0.12
GTF3A-201ENST00000381140 C17orf77Q96MU5 243 aa14.28□□□□□ -0.12
GTF3A-201ENST00000381140 KIR2DL5BA0A0G2JN68 375 aa14.27□□□□□ -0.12
GTF3A-201ENST00000381140 KIR2DL5BA0A0G2JPC4 375 aa14.27□□□□□ -0.12
GTF3A-201ENST00000381140 A0A1B0GV50 99 aa14.27□□□□□ -0.12
GTF3A-201ENST00000381140 EIF3GO75821 320 aaKnown RBP eCLIP14.27□□□□□ -0.12
GTF3A-201ENST00000381140 SAMD13Q5VXD3 122 aa14.27□□□□□ -0.12
GTF3A-201ENST00000381140 PQLC2Q6ZP29 291 aa14.27□□□□□ -0.12
GTF3A-201ENST00000381140 BPIFA4PQ86YQ2 179 aa14.27□□□□□ -0.12
GTF3A-201ENST00000381140 KIR2DL5AQ8N109 375 aa14.27□□□□□ -0.12
GTF3A-201ENST00000381140 KIR2DL5BQ8NHK3 375 aa14.27□□□□□ -0.12
GTF3A-201ENST00000381140 FAM167A-AS1Q96KT0 104 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms