RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 DEFA6Q01524 100 aa9.42□□□□□ -0.9
SMN1-202ENST00000380707 ZNF726P1Q15940 193 aa9.42□□□□□ -0.9
SMN1-202ENST00000380707 IGFL4Q6B9Z1 124 aa9.42□□□□□ -0.9
SMN1-202ENST00000380707 RAB24Q969Q5 203 aa9.42□□□□□ -0.9
SMN1-202ENST00000380707 OR51M1Q9H341 326 aa9.42□□□□□ -0.9
SMN1-202ENST00000380707 ZNF586Q9NXT0 402 aa9.42□□□□□ -0.9
SMN1-202ENST00000380707 NBEAL2Q6ZNJ1 2754 aa9.42□□□□□ -0.9
SMN1-202ENST00000380707 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 OR11H12B2RN74 326 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 SLC17A3O00476 420 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 OR7C2O60412 319 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 OR10J4P0C629 311 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 MEOX2P50222 304 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 TAS2R45P59539 299 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 ZNF124Q15973 351 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 KHDC3LQ587J8 217 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 APRG1Q8IVJ8 170 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 DEFB125Q8N687 156 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
SMN1-202ENST00000380707 MAP6D1Q9H9H5 199 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 ISLRO14498 428 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 STAG3L2P0CL84 134 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 STAG3L3P0CL85 134 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 HIST1H1EP10412 219 aaKnown RBP9.41□□□□□ -0.9
SMN1-202ENST00000380707 PSMB3P49720 205 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 DEFB131AP59861 70 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
SMN1-202ENST00000380707 PSMG4Q5JS54 123 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 RNF141Q8WVD5 230 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 SAT2Q96F10 170 aaPredicted RBP9.41□□□□□ -0.9
SMN1-202ENST00000380707 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 CITED4Q96RK1 184 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 FAM110AQ9BQ89 295 aa9.41□□□□□ -0.9
SMN1-202ENST00000380707 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
SMN1-202ENST00000380707 UMAD1C9J7I0 102 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 NBEAP1P0C6P0 100 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 ARL14EPLP0DKL9 152 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 ID1P41134 155 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 GUK1Q16774 197 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 EIF5AL1Q6IS14 154 aaKnown RBP9.4□□□□□ -0.91
SMN1-202ENST00000380707 LCN15Q6UWW0 184 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 PQLC2Q6ZP29 291 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 RNF182Q8N6D2 247 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 LRRC20Q8TCA0 184 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.91
SMN1-202ENST00000380707 DNAH9Q9NYC9 4486 aa9.4□□□□□ -0.91
SMN1-202ENST00000380707 CTXND1A0A1B0GTU2 59 aa9.39□□□□□ -0.91
SMN1-202ENST00000380707 NDUFB4O95168 129 aa9.39□□□□□ -0.91
SMN1-202ENST00000380707 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
SMN1-202ENST00000380707 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
SMN1-202ENST00000380707 CMC4P56277 68 aaPredicted RBP9.39□□□□□ -0.91
SMN1-202ENST00000380707 UBE2L3P68036 154 aaKnown RBP9.39□□□□□ -0.91
SMN1-202ENST00000380707 SAMD13Q5VXD3 122 aa9.39□□□□□ -0.91
SMN1-202ENST00000380707 FAM213BQ8TBF2 198 aa9.39□□□□□ -0.91
SMN1-202ENST00000380707 DEFB1P60022 68 aa9.38□□□□□ -0.91
SMN1-202ENST00000380707 PDE6HQ13956 83 aa9.38□□□□□ -0.91
SMN1-202ENST00000380707 DEFB121Q5J5C9 76 aa9.38□□□□□ -0.91
SMN1-202ENST00000380707 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
SMN1-202ENST00000380707 ZNF253O75346 499 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 CXorf1O96002 111 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 PRB4P10163 310 aaPredicted RBP9.37□□□□□ -0.91
SMN1-202ENST00000380707 GCHFRP30047 84 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 SULT1A2P50226 295 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 FGF8P55075 233 aaPredicted RBP9.37□□□□□ -0.91
SMN1-202ENST00000380707 FAM74A1Q5RGS3 127 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 ALKAL2Q6UX46 152 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 DPPA3Q6W0C5 159 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 MRAPQ8TCY5 172 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 PHYHIPLQ96FC7 376 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 SLC50A1Q9BRV3 221 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 TUBA4BQ9H853 241 aa9.37□□□□□ -0.91
SMN1-202ENST00000380707 MAP1LC3B2A6NCE7 125 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 KNCNA6PVL3 124 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 A8MZ25 164 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 RAB5CP51148 216 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 RANP62826 216 aaKnown RBP9.36□□□□□ -0.91
SMN1-202ENST00000380707 PSG3Q16557 428 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 EXOC3-AS1Q8N2X6 119 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 SUN5Q8TC36 379 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 SFT2D1Q8WV19 159 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 MAP1LC3BQ9GZQ8 125 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 TMPRSS5Q9H3S3 457 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 RBMY1BA6NDE4 496 aaKnown RBP9.36□□□□□ -0.91
SMN1-202ENST00000380707 RBMY1EA6NEQ0 496 aaKnown RBP9.36□□□□□ -0.91
SMN1-202ENST00000380707 ZNF705FA8MVS1 300 aaPredicted RBP9.36□□□□□ -0.91
SMN1-202ENST00000380707 F6UB75 175 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 RBMY1DP0C7P1 496 aaKnown RBP9.36□□□□□ -0.91
SMN1-202ENST00000380707 FRMD6-AS1P0C7T7 363 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 PSG9Q00887 426 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 MBD3L1Q8WWY6 194 aa9.36□□□□□ -0.91
SMN1-202ENST00000380707 H2AFB1P0C5Y9 115 aa9.35□□□□□ -0.91
SMN1-202ENST00000380707 ICAM4Q14773 271 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms