RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 HIST1H2BLQ99880 126 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 MLST8Q9BVC4 326 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 AAMDCQ9H7C9 122 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
USP3-202ENST00000380324 A6NDX4 124 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 GATA3P23771 443 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 BLCAPP62952 87 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 Q6ZS46 218 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 SMIM12Q96EX1 92 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 NAT8BQ9UHF3 227 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 ZNF469Q96JG9 3925 aaPredicted RBP9.31□□□□□ -0.92
USP3-202ENST00000380324 IGHV3-49A0A0A0MS15 119 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 ZNF207O43670 478 aaKnown RBP9.31□□□□□ -0.92
USP3-202ENST00000380324 TPPP2P59282 170 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 ATP5G2Q06055 141 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 PDE6HQ13956 83 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 C19orf54Q5BKX5 351 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 PACRGQ96M98 296 aaPredicted RBP9.31□□□□□ -0.92
USP3-202ENST00000380324 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
USP3-202ENST00000380324 TLN2Q9Y4G6 2542 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 TRBV7-1A0A0A6YYK4 115 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 P01737 135 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 PYY3Q5JQD4 70 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 IGFL4Q6B9Z1 124 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 LYPD1Q8N2G4 141 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 MBD6Q96DN6 1003 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 GRAMD2BQ96HH9 432 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 NEU1Q99519 415 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 K7EQM0 130 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 RPL19P84098 196 aaKnown RBP9.3□□□□□ -0.92
USP3-202ENST00000380324 KLK9Q2XQG4 91 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 Q5PR19 223 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 NUP35Q8NFH5 326 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
USP3-202ENST00000380324 KLK9Q9UKQ9 250 aa9.3□□□□□ -0.92
USP3-202ENST00000380324 MXRA5Q9NR99 2828 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 TEX15Q9BXT5 2789 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 IZUMO1RA6ND01 250 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 DIRC3C9JPN6 131 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 IGHV4-59P01825 116 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 AMBPP02760 352 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 COA6Q5JTJ3 125 aaKnown RBP9.29□□□□□ -0.92
USP3-202ENST00000380324 LCNL1Q6ZST4 164 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 TMEM75Q8N9X5 138 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 TSKUQ8WUA8 353 aa9.29□□□□□ -0.92
USP3-202ENST00000380324 DAZAP1Q96EP5 407 aaKnown RBP9.29□□□□□ -0.92
USP3-202ENST00000380324 IGKV2-40A0A087WW87 121 aaPredicted RBP9.28□□□□□ -0.92
USP3-202ENST00000380324 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 IGKV2D-40P01614 121 aaPredicted RBP9.28□□□□□ -0.92
USP3-202ENST00000380324 IGHG2P01859 326 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 IGF1P05019 195 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 HLA-DMBP28068 263 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 CRIP2P52943 208 aaPredicted RBP9.28□□□□□ -0.92
USP3-202ENST00000380324 PSG3Q16557 428 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 DEFB112Q30KQ8 113 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 TMEM95Q3KNT9 176 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 KIAA1644Q3SXP7 199 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 CDPF1Q6NVV7 123 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 TMEM136Q6ZRR5 245 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 TCF24Q7RTU0 167 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 FAM223AQ8IWN6 122 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 GBGT1Q8N5D6 347 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 ZC2HC1AQ96GY0 325 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 GNB1LQ9BYB4 327 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 SMAD5-AS1Q9Y6J3 95 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 CLPSL1A2RUU4 121 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 C19orf71A6NCJ1 209 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 M0QZK8 103 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 BUB3O43684 328 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 TRBV12-3P01733 135 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 IGHV3-11P01762 117 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 APOHP02749 345 aaPredicted RBP9.28□□□□□ -0.92
USP3-202ENST00000380324 DEFB113Q30KQ7 82 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 PRR31Q5SQ13 230 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 WDR73Q6P4I2 378 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 TMEM256Q8N2U0 113 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 PSG8Q9UQ74 426 aa9.28□□□□□ -0.92
USP3-202ENST00000380324 CCDC168Q8NDH2 2452 aa9.27□□□□□ -0.92
USP3-202ENST00000380324 PF4V1P10720 104 aa9.27□□□□□ -0.92
USP3-202ENST00000380324 CRISP2P16562 243 aa9.27□□□□□ -0.92
USP3-202ENST00000380324 CSN1S1P47710 185 aa9.27□□□□□ -0.92
USP3-202ENST00000380324 PSG9Q00887 426 aa9.27□□□□□ -0.92
USP3-202ENST00000380324 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.92
USP3-202ENST00000380324 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.92
USP3-202ENST00000380324 ZNF785A8K8V0 405 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 MT-ND6P03923 174 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 GZMBP10144 247 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 ARL3P36405 182 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 CAMPP49913 170 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 C8orf49Q96NF6 230 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 METTL26Q96S19 204 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 KLK15Q9H2R5 256 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
USP3-202ENST00000380324 F2Z2F3 143 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 PPIFP30405 207 aaKnown RBP9.26□□□□□ -0.93
USP3-202ENST00000380324 S100A7P31151 101 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 Q8TAT8 98 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 GTSF1Q8WW33 167 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 PRSS22Q9GZN4 317 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms