RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 RPL35AP18077 110 aaKnown RBP16.87■□□□□ 0.29
SKI-201ENST00000378536 C5orf52A6NGY3 159 aa16.87■□□□□ 0.29
SKI-201ENST00000378536 FOXL1Q12952 345 aa16.87■□□□□ 0.29
SKI-201ENST00000378536 C1orf194Q5T5A4 169 aa16.87■□□□□ 0.29
SKI-201ENST00000378536 ELANEP08246 267 aa16.87■□□□□ 0.29
SKI-201ENST00000378536 IGHV4-38-2P0DP08 117 aa16.87■□□□□ 0.29
SKI-201ENST00000378536 C2orf88Q9BSF0 95 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 SLC25A2Q9BXI2 301 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 TMEM160Q9NX00 188 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 H3BUA1 57 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 FXYD7P58549 80 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 C12orf54Q6X4T0 127 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 Q86TA4 180 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 RCHY1Q96PM5 261 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 SUMO2P61956 95 aaKnown RBP16.86■□□□□ 0.29
SKI-201ENST00000378536 ATOH7Q8N100 152 aa16.86■□□□□ 0.29
SKI-201ENST00000378536 HAPLN4Q86UW8 402 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 C1QTNF4Q9BXJ3 329 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 TCF21O43680 179 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 OR11H1Q8NG94 326 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 THAP8Q8NA92 274 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 CUL9Q8IWT3 2517 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 TRBV24-1A0A075B6N3 115 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 INSP01308 110 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 SLC25A34Q6PIV7 304 aa16.85■□□□□ 0.29
SKI-201ENST00000378536 IGLC7A0M8Q6 106 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 DEFB131AP59861 70 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 LYZL1Q6UWQ5 148 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 FAM19A2Q8N3H0 131 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 LRP4O75096 1905 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 ERCC8Q13216 396 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 TMEM170BQ5T4T1 132 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 UQCR10Q9UDW1 63 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 TMEM238LA0A1B0GVL6 79 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 A6NJY4 79 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 SERF1AO75920 110 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 IGLC1P0CG04 106 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 CBY1Q9Y3M2 126 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 IL15RAQ13261 267 aa16.84■□□□□ 0.29
SKI-201ENST00000378536 TRBV19A0A075B6N1 114 aa16.83■□□□□ 0.29
SKI-201ENST00000378536 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.83■□□□□ 0.29
SKI-201ENST00000378536 MST1LQ2TV78 715 aa16.83■□□□□ 0.29
SKI-201ENST00000378536 NXT2Q9NPJ8 142 aaKnown RBP16.83■□□□□ 0.29
SKI-201ENST00000378536 ZNF415Q09FC8 603 aa16.83■□□□□ 0.29
SKI-201ENST00000378536 GTF2H5Q6ZYL4 71 aa16.83■□□□□ 0.29
SKI-201ENST00000378536 FOXC2Q99958 501 aa16.83■□□□□ 0.29
SKI-201ENST00000378536 H3BRN7 92 aa16.83■□□□□ 0.28
SKI-201ENST00000378536 CIRBPQ14011 172 aaKnown RBP16.83■□□□□ 0.28
SKI-201ENST00000378536 RNF182Q8N6D2 247 aa16.83■□□□□ 0.28
SKI-201ENST00000378536 NPBQ8NG41 125 aa16.83■□□□□ 0.28
SKI-201ENST00000378536 SRSF1Q07955 248 aaKnown RBP eCLIP16.83■□□□□ 0.286e-8■■■■■ 28
SKI-201ENST00000378536 RAB37Q96AX2 223 aa16.82■□□□□ 0.28
SKI-201ENST00000378536 FREM1Q5H8C1 2179 aa16.82■□□□□ 0.28
SKI-201ENST00000378536 ZFP36P26651 326 aaKnown RBP16.82■□□□□ 0.28
SKI-201ENST00000378536 FAM90A2PQ658T7 463 aa16.82■□□□□ 0.28
SKI-201ENST00000378536 IGFBPL1Q8WX77 278 aa16.82■□□□□ 0.28
SKI-201ENST00000378536 LINC00479Q96M42 142 aa16.82■□□□□ 0.28
SKI-201ENST00000378536 TMEM75Q8N9X5 138 aa16.82■□□□□ 0.28
SKI-201ENST00000378536 ALKBH7Q9BT30 221 aaPredicted RBP16.82■□□□□ 0.28
SKI-201ENST00000378536 C19orf84I3L1E1 186 aa16.81■□□□□ 0.28
SKI-201ENST00000378536 EVI2AP22794 236 aa16.81■□□□□ 0.28
SKI-201ENST00000378536 CYYR1Q96J86 154 aa16.81■□□□□ 0.28
SKI-201ENST00000378536 PRDM13Q9H4Q3 707 aa16.81■□□□□ 0.28
SKI-201ENST00000378536 SMIM12Q96EX1 92 aa16.81■□□□□ 0.28
SKI-201ENST00000378536 MEIG1Q5JSS6 88 aa16.81■□□□□ 0.28
SKI-201ENST00000378536 RASL11AQ6T310 242 aa16.81■□□□□ 0.28
SKI-201ENST00000378536 ZNF25P17030 456 aaPredicted RBP16.81■□□□□ 0.28
SKI-201ENST00000378536 DNLZQ5SXM8 178 aa16.81■□□□□ 0.28
SKI-201ENST00000378536 CXCL1P09341 107 aa16.8■□□□□ 0.28
SKI-201ENST00000378536 OR11H2Q8NH07 326 aa16.8■□□□□ 0.28
SKI-201ENST00000378536 TMEM14CQ9P0S9 112 aa16.8■□□□□ 0.28
SKI-201ENST00000378536 LINC00614P0C842 121 aa16.8■□□□□ 0.28
SKI-201ENST00000378536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.8■□□□□ 0.288e-7■■□□□ 13.8
SKI-201ENST00000378536 HIST1H4GQ99525 98 aa16.8■□□□□ 0.28
SKI-201ENST00000378536 ZNF726P1Q15940 193 aa16.8■□□□□ 0.28
SKI-201ENST00000378536 UBE2E2Q96LR5 201 aa16.8■□□□□ 0.28
SKI-201ENST00000378536 TCTEX1D4Q5JR98 221 aa16.8■□□□□ 0.28
SKI-201ENST00000378536 HOXA5P20719 270 aa16.79■□□□□ 0.28
SKI-201ENST00000378536 PRSS2P07478 247 aa16.79■□□□□ 0.28
SKI-201ENST00000378536 NUP35Q8NFH5 326 aa16.79■□□□□ 0.28
SKI-201ENST00000378536 C8orf86Q6ZUL3 223 aa16.79■□□□□ 0.28
SKI-201ENST00000378536 IFI27P40305 119 aaPredicted RBP16.79■□□□□ 0.28
SKI-201ENST00000378536 ORMDL2Q53FV1 153 aa16.79■□□□□ 0.28
SKI-201ENST00000378536 C22orf34Q6ZV56 151 aa16.79■□□□□ 0.28
SKI-201ENST00000378536 COPS9Q8WXC6 57 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 TRGV1A0A0A0MS02 117 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HBDP02042 147 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BKO60814 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 RPLP1P05386 114 aaKnown RBP16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BJP06899 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BOP23527 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BBP33778 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BDP58876 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BCP62807 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST2H2BEQ16778 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BHQ93079 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BNQ99877 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 HIST1H2BMQ99879 126 aa16.78■□□□□ 0.28
SKI-201ENST00000378536 FNDC4Q9H6D8 234 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms