RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 IGKV1-9A0A0C4DH69 117 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 HEPN1Q6WQI6 88 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 SPTA1P02549 2419 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 A0A0G2JMZ2 1700 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 LRRC37A2A6NM11 1700 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 LINC00587B1AMM8 73 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 MST1LQ2TV78 715 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 SIGLEC9Q9Y336 463 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 A0A1B0GWJ7 208 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 RPRMLQ8N4K4 120 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 ANGP03950 147 aaKnown RBP11.48□□□□□ -0.57
TRIM13-202ENST00000378182 UBE2E1P51965 193 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 TAL2Q16559 108 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 RASL11AQ6T310 242 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 ANAPC13Q9BS18 74 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.47□□□□□ -0.575e-9■■■■□ 20.9
TRIM13-202ENST00000378182 GSN-AS1Q9NRJ2 163 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 G3V318 75 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 RPL18AQ02543 176 aaKnown RBP11.47□□□□□ -0.57
TRIM13-202ENST00000378182 PSG3Q16557 428 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 GGTLC1Q9BX51 225 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
TRIM13-202ENST00000378182 IGKV1-39P01597 117 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 IGKV1D-39P04432 117 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 MLANAQ16655 118 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 OCIAD2Q56VL3 154 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 C5orf30Q96GV9 206 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 C8orf49Q96NF6 230 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 IGHV1-69DA0A0B4J2H0 117 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 A8MWV9 139 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 IGHV1-69P01742 117 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 H3BMM0 161 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 TNFRSF6BO95407 300 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 MCRIP2Q9BUT9 160 aaKnown RBP11.46□□□□□ -0.57
TRIM13-202ENST00000378182 FAM186AA6NE01 2351 aa11.46□□□□□ -0.57
TRIM13-202ENST00000378182 CD200R1LQ6Q8B3 271 aa11.46□□□□□ -0.58
TRIM13-202ENST00000378182 HEATR5AQ86XA9 2040 aa11.46□□□□□ -0.58
TRIM13-202ENST00000378182 FRMPD3Q5JV73 1810 aa11.46□□□□□ -0.58
TRIM13-202ENST00000378182 SRRM5B3KS81 715 aa11.46□□□□□ -0.58
TRIM13-202ENST00000378182 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.45□□□□□ -0.58
TRIM13-202ENST00000378182 MTURNQ8N3F0 131 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 PPBPP02775 128 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 Q6ZQT7 251 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 IGKV1D-8A0A087WSZ0 117 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 hADV29S1A0JD25 119 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 IGFBP3P17936 291 aaPredicted RBP11.45□□□□□ -0.58
TRIM13-202ENST00000378182 SAMD5Q5TGI4 173 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 NDUFS8O00217 210 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 NHLRC3Q5JS37 347 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 C9orf139Q6ZV77 190 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 SRSF3P84103 164 aaKnown RBP11.45□□□□□ -0.58
TRIM13-202ENST00000378182 C2orf82Q6UX34 121 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 TMEM158Q8WZ71 300 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 IGHV4-4A0A075B6R2 117 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 CLPSL1A2RUU4 121 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 SUPT4H1P63272 117 aaKnown RBP11.45□□□□□ -0.58
TRIM13-202ENST00000378182 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
TRIM13-202ENST00000378182 PLEKHB2Q96CS7 222 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 KIF26AQ9ULI4 1882 aaPredicted RBP11.44□□□□□ -0.58
TRIM13-202ENST00000378182 ADAMTS9Q9P2N4 1935 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 KLF5Q13887 457 aaPredicted RBP11.44□□□□□ -0.58
TRIM13-202ENST00000378182 TREML4Q6UXN2 200 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 WFDC1Q9HC57 220 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 IGKV1-27A0A075B6S5 117 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 ZNRF2Q8NHG8 242 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 REG4Q9BYZ8 158 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 SHISA3A0PJX4 238 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 RMI2Q96E14 147 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 LINC00114Q6XXX2 140 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 TRGV9Q99603 122 aa11.44□□□□□ -0.58
TRIM13-202ENST00000378182 IGKV1-12A0A0C4DH73 117 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 PRSS29PA6NIE9 313 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 IGKV1D-12P01611 117 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 DEFB136Q30KP8 78 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 RNASE13Q5GAN3 156 aaKnown RBP11.43□□□□□ -0.58
TRIM13-202ENST00000378182 FAM120AOSQ5T036 256 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 MYMXA0A1B0GTQ4 84 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 CD5LO43866 347 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 CFHR2P36980 270 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 FLVCR1-AS1Q8TAF5 88 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 WNK2Q9Y3S1 2297 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 LIME1Q9H400 295 aa11.43□□□□□ -0.58
TRIM13-202ENST00000378182 IGKV1D-17A0A075B6S4 117 aa11.42□□□□□ -0.58
TRIM13-202ENST00000378182 A0A1W2PRE2 83 aa11.42□□□□□ -0.58
TRIM13-202ENST00000378182 hDV102S1A0JD36 115 aa11.42□□□□□ -0.58
TRIM13-202ENST00000378182 GATA3P23771 443 aa11.42□□□□□ -0.58
TRIM13-202ENST00000378182 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
TRIM13-202ENST00000378182 TRAV12-1A0A0B4J245 112 aa11.42□□□□□ -0.58
TRIM13-202ENST00000378182 CHCHD1Q96BP2 118 aaKnown RBP11.42□□□□□ -0.58
TRIM13-202ENST00000378182 OSTCQ9NRP0 149 aa11.42□□□□□ -0.58
TRIM13-202ENST00000378182 RPP25LQ8N5L8 163 aaKnown RBP11.42□□□□□ -0.58
TRIM13-202ENST00000378182 SPTBN2O15020 2390 aa11.42□□□□□ -0.58
TRIM13-202ENST00000378182 SPOCK3Q9BQ16 436 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 RFNGQ9Y644 331 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 IGKV1-16P04430 117 aa11.41□□□□□ -0.58
TRIM13-202ENST00000378182 ZNF479Q96JC4 524 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms