RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 RNASE4P34096 147 aaKnown RBP12.21□□□□□ -0.45
NPHP4-201ENST00000378156 DUX3Q96PT4 197 aa12.21□□□□□ -0.45
NPHP4-201ENST00000378156 ITGB1BP1O14713 200 aa12.21□□□□□ -0.46
NPHP4-201ENST00000378156 DKK1O94907 266 aa12.21□□□□□ -0.46
NPHP4-201ENST00000378156 GATA4P43694 442 aa12.21□□□□□ -0.46
NPHP4-201ENST00000378156 PRR31Q5SQ13 230 aa12.21□□□□□ -0.46
NPHP4-201ENST00000378156 C11orf68Q9H3H3 251 aaKnown RBP12.21□□□□□ -0.46
NPHP4-201ENST00000378156 ZNRD1Q9P1U0 126 aa12.21□□□□□ -0.46
NPHP4-201ENST00000378156 KIR3DL3Q8N743 410 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 ERG28Q9UKR5 140 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 FAM215AQ9Y5M1 114 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-201ENST00000378156 C3orf79P0CE67 100 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 ATXN8Q156A1 80 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 ZNF726P1Q15940 193 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 TDGF1P3P51864 188 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 SFTA2Q6UW10 78 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 GLMPQ8WWB7 406 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 SPANXA1Q9NS26 97 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 IGHV4-39P01824 125 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 BCL6BQ8N143 479 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-201ENST00000378156 SSC4DQ8WTU2 575 aa12.2□□□□□ -0.46
NPHP4-201ENST00000378156 YLPM1P49750 1951 aaKnown RBP12.2□□□□□ -0.46
NPHP4-201ENST00000378156 TRAV21A0A0B4J279 112 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 PMS2P5A8MQ11 134 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 CD5LO43866 347 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 ESDP10768 282 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 FAM71F2Q6NXP2 309 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.19□□□□□ -0.46
NPHP4-201ENST00000378156 TRGV9Q99603 122 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 TMEM8BA6NDV4 472 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 IGLV1-44P01699 117 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 MPV17L2Q567V2 206 aa12.19□□□□□ -0.46
NPHP4-201ENST00000378156 CD33P20138 364 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 LINC01587Q99440 93 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 C2orf16Q68DN1 1984 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 C20orf144Q9BQM9 153 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 A8MWP6 167 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 Q8TCH9 128 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 OBSL1O75147 1896 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 GUSBP1Q15486 140 aa12.18□□□□□ -0.46
NPHP4-201ENST00000378156 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
NPHP4-201ENST00000378156 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
NPHP4-201ENST00000378156 HAPLN4Q86UW8 402 aa12.17□□□□□ -0.46
NPHP4-201ENST00000378156 SLC25A39Q9BZJ4 359 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-201ENST00000378156 SCRT1Q9BWW7 348 aa12.17□□□□□ -0.46
NPHP4-201ENST00000378156 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
NPHP4-201ENST00000378156 DUSP14O95147 198 aaKnown RBP12.17□□□□□ -0.46
NPHP4-201ENST00000378156 PGPEP1Q9NXJ5 209 aa12.17□□□□□ -0.46
NPHP4-201ENST00000378156 TOMM7Q9P0U1 55 aa12.17□□□□□ -0.46
NPHP4-201ENST00000378156 WT1P19544 449 aaPredicted RBP12.17□□□□□ -0.46
NPHP4-201ENST00000378156 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
NPHP4-201ENST00000378156 SYS1-DBNDD2H3BUS1 97 aa12.16□□□□□ -0.46
NPHP4-201ENST00000378156 LAGE3Q14657 143 aa12.16□□□□□ -0.46
NPHP4-201ENST00000378156 FGF23Q9GZV9 251 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-201ENST00000378156 CD7P09564 240 aa12.16□□□□□ -0.46
NPHP4-201ENST00000378156 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
NPHP4-201ENST00000378156 SLC25A16P16260 332 aa12.16□□□□□ -0.46
NPHP4-201ENST00000378156 SAA4P35542 130 aa12.16□□□□□ -0.46
NPHP4-201ENST00000378156 DLX4Q92988 240 aaPredicted RBP12.16□□□□□ -0.46
NPHP4-201ENST00000378156 RPL15P61313 204 aaKnown RBP12.16□□□□□ -0.46
NPHP4-201ENST00000378156 SLC25A20O43772 301 aa12.15□□□□□ -0.46
NPHP4-201ENST00000378156 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
NPHP4-201ENST00000378156 CFHR2P36980 270 aa12.15□□□□□ -0.46
NPHP4-201ENST00000378156 DUX4L9Q6RFH8 374 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-201ENST00000378156 SIGLEC15Q6ZMC9 328 aa12.15□□□□□ -0.46
NPHP4-201ENST00000378156 NCOR1P1Q9H4R4 102 aa12.15□□□□□ -0.46
NPHP4-201ENST00000378156 IGLV3-9A0A075B6K5 115 aa12.15□□□□□ -0.46
NPHP4-201ENST00000378156 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
NPHP4-201ENST00000378156 EXOC3-AS1Q8N2X6 119 aa12.15□□□□□ -0.46
NPHP4-201ENST00000378156 NCOA6Q14686 2063 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-201ENST00000378156 SSBP2P81877 361 aaPredicted RBP12.15□□□□□ -0.47
NPHP4-201ENST00000378156 LINC00479Q96M42 142 aa12.15□□□□□ -0.47
NPHP4-201ENST00000378156 TRAV12-3A0A0B4J271 114 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 GGTLC3B5MD39 225 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 M0R2P5 195 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 Q0VG73 95 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 Q8NFD4 153 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 NPIPB5A8MRT5 1133 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 TDGF1P13385 188 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 SRD5A1P18405 259 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 PLCE1Q9P212 2302 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 ATRXP46100 2492 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 PIEZO1Q92508 2521 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 OVOL1O14753 267 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 TCF15Q12870 199 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 CFAP161Q6P656 301 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-201ENST00000378156 STHQ8IWL8 128 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
NPHP4-201ENST00000378156 WDR87Q6ZQQ6 2873 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 FREM1Q5H8C1 2179 aa12.14□□□□□ -0.47
NPHP4-201ENST00000378156 LTBP2Q14767 1821 aa12.13□□□□□ -0.47
NPHP4-201ENST00000378156 A0A087X0K7 114 aa12.13□□□□□ -0.47
NPHP4-201ENST00000378156 PPIFP30405 207 aaKnown RBP12.13□□□□□ -0.47
NPHP4-201ENST00000378156 CD300EQ496F6 205 aaPredicted RBP12.13□□□□□ -0.47
NPHP4-201ENST00000378156 ARFGEF3Q5TH69 2177 aa12.13□□□□□ -0.47
NPHP4-201ENST00000378156 hDV102S1A0JD36 115 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms