RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ADAMTSL5Q6ZMM2 481 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 NRGNQ92686 78 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 SBF1O95248 1867 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 CLPSL2Q6UWE3 100 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 LY96Q9Y6Y9 160 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 PLNP26678 52 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 LINC00158P58513 81 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 S100A7L2Q5SY68 101 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 ZNF625Q96I27 306 aaPredicted RBP9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 EDA2RQ9HAV5 297 aa9.78□□□□□ -0.84
PCDHA9-201ENST00000378122 SLC25A20O43772 301 aa9.77□□□□□ -0.84
PCDHA9-201ENST00000378122 SSBP2P81877 361 aaPredicted RBP9.77□□□□□ -0.84
PCDHA9-201ENST00000378122 PSG3Q16557 428 aa9.77□□□□□ -0.84
PCDHA9-201ENST00000378122 ZNF48Q96MX3 618 aaPredicted RBP9.77□□□□□ -0.84
PCDHA9-201ENST00000378122 IGHV1-3A0A0C4DH29 117 aa9.77□□□□□ -0.84
PCDHA9-201ENST00000378122 Q8TAT8 98 aa9.77□□□□□ -0.84
PCDHA9-201ENST00000378122 LTBP1Q14766 1721 aa9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 H0YJW9 148 aa9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 KLF17Q5JT82 389 aaPredicted RBP9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 C15orf62A8K5M9 175 aa9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 OVOL1O14753 267 aa9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 CEACAM8P31997 349 aaPredicted RBP9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 ZFP36L1Q07352 338 aaKnown RBP9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 TRGV9Q99603 122 aa9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 IGHV1-8P0DP01 117 aa9.77□□□□□ -0.85
PCDHA9-201ENST00000378122 IGHV3-16A0A0C4DH30 117 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 DLX4Q92988 240 aaPredicted RBP9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 TRAV8-1A0A0A6YYK1 113 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 SNHG12Q9BXW3 62 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 IGHV2-70P01814 119 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 CRIPAKQ8N1N5 446 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 GAFA1Q96PS6 74 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 OCIAD2Q56VL3 154 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 CHAC1Q9BUX1 264 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 CD5LO43866 347 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 DUSP14O95147 198 aaKnown RBP9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 GATD1Q8NB37 220 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 TMEM158Q8WZ71 300 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 ABCA1O95477 2261 aa9.76□□□□□ -0.85
PCDHA9-201ENST00000378122 NCOR1O75376 2440 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 SRRM5B3KS81 715 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 TMEM238C9JI98 176 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 IL18BPO95998 194 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 MLANAQ16655 118 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 TSC2P49815 1807 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 PLCE1Q9P212 2302 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 PTPRDP23468 1912 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 SPINK8P0C7L1 97 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 C15orf32Q32M92 178 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 NBL1P41271 181 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 FHL1Q13642 323 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 WNK2Q9Y3S1 2297 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 TRAV41A0A0B4J266 112 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 MSMBP08118 114 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 NPSP0C0P6 89 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 HIST1H4AP62805 103 aaKnown RBP9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 Q6ZRM9 215 aa9.75□□□□□ -0.85
PCDHA9-201ENST00000378122 ERCC8Q13216 396 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 C2orf82Q6UX34 121 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 FCN3O75636 299 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 COL8A2P25067 703 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 A0A1B0GWJ7 208 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 GGTLC3B5MD39 225 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 LINC00479Q96M42 142 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 FAM186AA6NE01 2351 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 COL4A6Q14031 1691 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 TRBV6-6A0A0A6YYG2 114 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 TMEM178BH3BS89 294 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 STPG4Q8N801 248 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 TNFRSF14Q92956 283 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 Q9HAA7 133 aa9.74□□□□□ -0.85
PCDHA9-201ENST00000378122 RPL32P62910 135 aaKnown RBP9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 TMEM249Q2WGJ8 235 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 HIST2H2BCQ6DN03 193 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 MED12Q93074 2177 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 PHF3Q92576 2039 aaKnown RBP9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 NTN3O00634 580 aaPredicted RBP9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 AMN1Q8IY45 258 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 RSPO3Q9BXY4 272 aaPredicted RBP9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 Q0VG73 95 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 PLSCR4Q9NRQ2 329 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 CSTL1Q9H114 145 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 TOMM40O96008 361 aa9.73□□□□□ -0.85
PCDHA9-201ENST00000378122 IGKV1D-17A0A075B6S4 117 aa9.72□□□□□ -0.85
PCDHA9-201ENST00000378122 C10orf91Q5T1B1 145 aa9.72□□□□□ -0.85
PCDHA9-201ENST00000378122 C8orf49Q96NF6 230 aa9.72□□□□□ -0.85
PCDHA9-201ENST00000378122 RCHY1Q96PM5 261 aa9.72□□□□□ -0.85
PCDHA9-201ENST00000378122 B3GALT5-AS1P59052 145 aa9.72□□□□□ -0.85
PCDHA9-201ENST00000378122 Q86TA4 180 aa9.72□□□□□ -0.85
PCDHA9-201ENST00000378122 PRADC1Q9BSG0 188 aa9.72□□□□□ -0.85
PCDHA9-201ENST00000378122 C20orf144Q9BQM9 153 aa9.71□□□□□ -0.85
PCDHA9-201ENST00000378122 ZNRD1Q9P1U0 126 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms