RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SIGLEC8Q9NYZ4 499 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 TMEM155Q4W5P6 130 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 NDUFS8O00217 210 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 EMP1P54849 157 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 WT1-ASQ06250 92 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 C5orf64Q2M2E5 130 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 C19orf54Q5BKX5 351 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 ZFAND6Q6FIF0 208 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 C9orf139Q6ZV77 190 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 C8orf49Q96NF6 230 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 ZNF747Q9BV97 191 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 TMEM213A2RRL7 107 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 Q6ZPA2 131 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 DTX1Q86Y01 620 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 ABCA7Q8IZY2 2146 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 FAM168AQ92567 244 aa7.04□□□□□ -1.28
PCDH9-202ENST00000377865 IGLV3-9A0A075B6K5 115 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 NDUFB8O95169 186 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 PPIFP30405 207 aaKnown RBP7.03□□□□□ -1.28
PCDH9-202ENST00000377865 LINC01545Q5VT33 79 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 LINC01560Q8TB33 94 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 DYNLRB2Q8TF09 96 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 BEX4Q9NWD9 120 aaPredicted RBP7.03□□□□□ -1.28
PCDH9-202ENST00000377865 ASCC3Q8N3C0 2202 aaKnown RBP7.03□□□□□ -1.28
PCDH9-202ENST00000377865 TRBV7-1A0A0A6YYK4 115 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 INS-IGF2F8WCM5 200 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 SMKR1H3BMG3 65 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 FXYD7P58549 80 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 CEND1Q8N111 149 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 ZC2HC1AQ96GY0 325 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 GTSF1LQ9H1H1 148 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 IGHV3OR16-13A0A075B7E8 117 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 IGHV3-74A0A0B4J1X5 117 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 TMEM238C9JI98 176 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 TSPAN13O95857 204 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 LINC00477Q96M19 166 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 UBE2L6O14933 153 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 C10orf126Q8N4M7 172 aa7.03□□□□□ -1.28
PCDH9-202ENST00000377865 OR11H6Q8NGC7 330 aa7.02□□□□□ -1.28
PCDH9-202ENST00000377865 RAX2Q96IS3 184 aa7.02□□□□□ -1.28
PCDH9-202ENST00000377865 SPANXA1Q9NS26 97 aa7.02□□□□□ -1.28
PCDH9-202ENST00000377865 TNFRSF18Q9Y5U5 241 aa7.02□□□□□ -1.28
PCDH9-202ENST00000377865 TMEM8BA6NDV4 472 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 HTN1P15515 57 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 CD24P25063 80 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 PLEKHB2Q96CS7 222 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 ERG28Q9UKR5 140 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 COLQQ9Y215 455 aaPredicted RBP7.02□□□□□ -1.29
PCDH9-202ENST00000377865 SHISA9B4DS77 424 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 IGHV3-49A0A0A0MS15 119 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 SRRM4A7MD48 611 aaKnown RBP7.02□□□□□ -1.29
PCDH9-202ENST00000377865 LYPD2Q6UXB3 125 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 Q8TAT8 98 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 TRBV6-1A0A0K0K1D8 114 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 SSBP2P81877 361 aaPredicted RBP7.02□□□□□ -1.29
PCDH9-202ENST00000377865 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
PCDH9-202ENST00000377865 LHBP01229 141 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 PAX8Q06710 450 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 ATXN8Q156A1 80 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 CNTRLQ7Z7A1 2325 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 CLEC2AQ6UVW9 174 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 ZNRD1Q9P1U0 126 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 DOCK8Q8NF50 2099 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 TRAV40A0A0B4J280 105 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 KLF12Q9Y4X4 402 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 MYMXA0A1B0GTQ4 84 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 THBDP07204 575 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 IGLC1P0CG04 106 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 CR1LQ2VPA4 569 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 MEIG1Q5JSS6 88 aa7.01□□□□□ -1.29
PCDH9-202ENST00000377865 IGHV3OR16-8A0A075B7F1 116 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 EIF4EBP1Q13541 118 aaPredicted RBP7□□□□□ -1.29
PCDH9-202ENST00000377865 C15orf32Q32M92 178 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 CD300EQ496F6 205 aaPredicted RBP7□□□□□ -1.29
PCDH9-202ENST00000377865 RNF182Q8N6D2 247 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 FAM167A-AS1Q96KT0 104 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 PRR25Q96S07 402 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7□□□□□ -1.29
PCDH9-202ENST00000377865 TAX1BP3O14907 124 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 NDUFS7O75251 213 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 GP9P14770 177 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 RNASE8Q8TDE3 154 aaKnown RBP7□□□□□ -1.29
PCDH9-202ENST00000377865 JMJD8Q96S16 334 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 TRGV11A0A075B6L2 103 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 TRBV20-1A0A075B6N2 111 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 VCYO14598 125 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 DUSP14O95147 198 aaKnown RBP7□□□□□ -1.29
PCDH9-202ENST00000377865 TGFAP01135 160 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 ZNF672Q499Z4 452 aaPredicted RBP7□□□□□ -1.29
PCDH9-202ENST00000377865 DUX5Q96PT3 197 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 TRAV2A0A0B4J234 112 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 FAM223BA6NKX1 122 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 Q5PR19 223 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 DUX4L9Q6RFH8 374 aaPredicted RBP7□□□□□ -1.29
PCDH9-202ENST00000377865 VMO1Q7Z5L0 202 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 FAM223AQ8IWN6 122 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 TMEM141Q96I45 108 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 CSTL1Q9H114 145 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 IGHV4-39P01824 125 aa7□□□□□ -1.29
PCDH9-202ENST00000377865 CD7P09564 240 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms