RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 HIST1H1EP10412 219 aaKnown RBP15.96■□□□□ 0.15
CBWD3-202ENST00000377342 LCN12Q6JVE5 192 aa15.96■□□□□ 0.15
CBWD3-202ENST00000377342 SFT2D1Q8WV19 159 aa15.96■□□□□ 0.15
CBWD3-202ENST00000377342 TMPRSS5Q9H3S3 457 aa15.96■□□□□ 0.15
CBWD3-202ENST00000377342 TFPI2P48307 235 aa15.95■□□□□ 0.14
CBWD3-202ENST00000377342 SUN5Q8TC36 379 aa15.95■□□□□ 0.14
CBWD3-202ENST00000377342 PCNPQ8WW12 178 aaKnown RBP15.95■□□□□ 0.14
CBWD3-202ENST00000377342 SPAG8Q99932 426 aaPredicted RBP15.95■□□□□ 0.14
CBWD3-202ENST00000377342 ZNF256Q9Y2P7 627 aaPredicted RBP15.95■□□□□ 0.14
CBWD3-202ENST00000377342 NDUFB4O95168 129 aa15.95■□□□□ 0.14
CBWD3-202ENST00000377342 SAMD5Q5TGI4 173 aa15.95■□□□□ 0.14
CBWD3-202ENST00000377342 FAM24BQ8N5W8 94 aa15.95■□□□□ 0.14
CBWD3-202ENST00000377342 SAT2Q96F10 170 aaPredicted RBP15.95■□□□□ 0.14
CBWD3-202ENST00000377342 GPR61Q9BZJ8 451 aa15.95■□□□□ 0.14
CBWD3-202ENST00000377342 DNAH3Q8TD57 4116 aa15.94■□□□□ 0.14
CBWD3-202ENST00000377342 TRBV19A0A075B6N1 114 aa15.94■□□□□ 0.14
CBWD3-202ENST00000377342 TRAV1-1A0A0B4J248 108 aa15.94■□□□□ 0.14
CBWD3-202ENST00000377342 G3V4G9 280 aa15.94■□□□□ 0.14
CBWD3-202ENST00000377342 K7EQG2 157 aa15.94■□□□□ 0.14
CBWD3-202ENST00000377342 TRAV8-2A0A0B4J237 113 aa15.93■□□□□ 0.14
CBWD3-202ENST00000377342 NBEAP1P0C6P0 100 aa15.93■□□□□ 0.14
CBWD3-202ENST00000377342 BLNKQ8WV28 456 aa15.93■□□□□ 0.14
CBWD3-202ENST00000377342 TRAV2A0A0B4J234 112 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 NMBP08949 121 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 GUCA2BQ16661 112 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 GUK1Q16774 197 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 WFDC3Q8IUB2 231 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 IQCF2Q8IXL9 164 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 MEOX2P50222 304 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 CCL20P78556 96 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 EGFEM1PQ0D2K5 195 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 PDE6HQ13956 83 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 BEAN1Q3B7T3 259 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 IGFL4Q6B9Z1 124 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 ZNF767PQ75MW2 155 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 LYPD6BQ8NI32 183 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 ZNF331Q9NQX6 463 aaPredicted RBP15.92■□□□□ 0.14
CBWD3-202ENST00000377342 TMEM167BQ9NRX6 74 aa15.92■□□□□ 0.14
CBWD3-202ENST00000377342 DNASE2O00115 360 aaPredicted RBP15.91■□□□□ 0.14
CBWD3-202ENST00000377342 PAFAH1B2P68402 229 aa15.91■□□□□ 0.14
CBWD3-202ENST00000377342 BLOC1S1P78537 153 aa15.91■□□□□ 0.14
CBWD3-202ENST00000377342 LRRC20Q8TCA0 184 aa15.91■□□□□ 0.14
CBWD3-202ENST00000377342 OR4C46A6NHA9 309 aa15.9■□□□□ 0.14
CBWD3-202ENST00000377342 ZNF253O75346 499 aa15.9■□□□□ 0.14
CBWD3-202ENST00000377342 ISLRO14498 428 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 HBE1P02100 147 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 HLA-DMBP28068 263 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 KRTAP10-11P60412 298 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 RNF182Q8N6D2 247 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 C20orf173Q96LM9 149 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 SLC50A1Q9BRV3 221 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 PSMB3P49720 205 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 ODF3L2Q3SX64 289 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 C16orf92Q96LL3 132 aa15.89■□□□□ 0.13
CBWD3-202ENST00000377342 YTHDF2Q9Y5A9 579 aaKnown RBP15.89■□□□□ 0.13
CBWD3-202ENST00000377342 RGS13O14921 159 aa15.88■□□□□ 0.13
CBWD3-202ENST00000377342 ZNF688P0C7X2 276 aa15.88■□□□□ 0.13
CBWD3-202ENST00000377342 EXOC3-AS1Q8N2X6 119 aa15.88■□□□□ 0.13
CBWD3-202ENST00000377342 CD7P09564 240 aa15.87■□□□□ 0.13
CBWD3-202ENST00000377342 RANP62826 216 aaKnown RBP15.87■□□□□ 0.13
CBWD3-202ENST00000377342 SAMD13Q5VXD3 122 aa15.87■□□□□ 0.13
CBWD3-202ENST00000377342 Q9H3A6 140 aa15.87■□□□□ 0.13
CBWD3-202ENST00000377342 MAP6D1Q9H9H5 199 aa15.87■□□□□ 0.13
CBWD3-202ENST00000377342 GGTLC3B5MD39 225 aa15.86■□□□□ 0.13
CBWD3-202ENST00000377342 UBE2G2P60604 165 aa15.86■□□□□ 0.13
CBWD3-202ENST00000377342 FAM74A7A6NL05 159 aa15.86■□□□□ 0.13
CBWD3-202ENST00000377342 TEX46H3BTG2 121 aa15.86■□□□□ 0.13
CBWD3-202ENST00000377342 C19orf73Q9NVV2 129 aa15.86■□□□□ 0.13
CBWD3-202ENST00000377342 M0R3E3 92 aa15.85■□□□□ 0.13
CBWD3-202ENST00000377342 PRB4P10163 310 aaPredicted RBP15.85■□□□□ 0.13
CBWD3-202ENST00000377342 PSG9Q00887 426 aa15.85■□□□□ 0.13
CBWD3-202ENST00000377342 ICAM4Q14773 271 aa15.85■□□□□ 0.13
CBWD3-202ENST00000377342 PSMG4Q5JS54 123 aa15.85■□□□□ 0.13
CBWD3-202ENST00000377342 KPRPQ5T749 579 aaPredicted RBP15.85■□□□□ 0.13
CBWD3-202ENST00000377342 GNG13Q9P2W3 67 aa15.85■□□□□ 0.13
CBWD3-202ENST00000377342 A0A1W2PRE2 83 aa15.84■□□□□ 0.13
CBWD3-202ENST00000377342 ID1P41134 155 aa15.84■□□□□ 0.13
CBWD3-202ENST00000377342 DEFB1P60022 68 aa15.84■□□□□ 0.13
CBWD3-202ENST00000377342 LYPD1Q8N2G4 141 aa15.84■□□□□ 0.13
CBWD3-202ENST00000377342 PRR25Q96S07 402 aa15.84■□□□□ 0.13
CBWD3-202ENST00000377342 WFDC10AQ9H1F0 79 aa15.84■□□□□ 0.13
CBWD3-202ENST00000377342 AGRNO00468 2067 aa15.84■□□□□ 0.13
CBWD3-202ENST00000377342 PAGE4O60829 102 aa15.83■□□□□ 0.13
CBWD3-202ENST00000377342 CD81P60033 236 aa15.83■□□□□ 0.13
CBWD3-202ENST00000377342 SNRPD3P62318 126 aaKnown RBP15.83■□□□□ 0.13
CBWD3-202ENST00000377342 PMS2P11Q13670 270 aa15.83■□□□□ 0.13
CBWD3-202ENST00000377342 CLLU1Q5K131 121 aa15.83■□□□□ 0.13
CBWD3-202ENST00000377342 LINC00052Q96N35 136 aa15.83■□□□□ 0.13
CBWD3-202ENST00000377342 OTORQ9NRC9 128 aa15.83■□□□□ 0.13
CBWD3-202ENST00000377342 ARL2-SNX15V9GYD0 113 aa15.83■□□□□ 0.13
CBWD3-202ENST00000377342 DEFB131AP59861 70 aa15.83■□□□□ 0.12
CBWD3-202ENST00000377342 ZNF124Q15973 351 aa15.83■□□□□ 0.12
CBWD3-202ENST00000377342 PSG3Q16557 428 aa15.83■□□□□ 0.12
CBWD3-202ENST00000377342 AAMDCQ9H7C9 122 aa15.83■□□□□ 0.12
CBWD3-202ENST00000377342 MANBALQ9NQG1 85 aa15.83■□□□□ 0.12
CBWD3-202ENST00000377342 ZNF705FA8MVS1 300 aaPredicted RBP15.82■□□□□ 0.12
CBWD3-202ENST00000377342 ATP5G3P48201 142 aa15.82■□□□□ 0.12
CBWD3-202ENST00000377342 PPT1P50897 306 aa15.82■□□□□ 0.12
CBWD3-202ENST00000377342 FAM110AQ9BQ89 295 aa15.82■□□□□ 0.12
CBWD3-202ENST00000377342 Q8N1Y9 231 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms