RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 USF2Q15853 346 aaPredicted RBP9.55□□□□□ -0.88
CLCN6-205ENST00000376492 OR51G1Q8NGK1 321 aa9.55□□□□□ -0.88
CLCN6-205ENST00000376492 NARS2Q96I59 477 aaKnown RBP9.55□□□□□ -0.88
CLCN6-205ENST00000376492 NPCDR1Q9BY65 106 aa9.55□□□□□ -0.88
CLCN6-205ENST00000376492 SMIM3Q9BZL3 60 aa9.55□□□□□ -0.88
CLCN6-205ENST00000376492 IGKV1OR2-108A0A075B7D4 117 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 ATP6V0CP27449 155 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 SULT1A2P50226 295 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 RAB14P61106 215 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 C16orf54Q6UWD8 224 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 LINC00336Q6ZUF6 198 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 RNF125Q96EQ8 232 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 GRAMD2BQ96HH9 432 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 MS4A6AQ9H2W1 248 aa9.54□□□□□ -0.88
CLCN6-205ENST00000376492 UBE2L5PA0A1B0GUS4 154 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 BUB3O43684 328 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 CAMLGP49069 296 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 BLOC1S1P78537 153 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 AKR1C1Q04828 323 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 CLLU1Q5K131 121 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 GBGT1Q8N5D6 347 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 Q8NAQ8 132 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 GLMPQ8WWB7 406 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 RABAC1Q9UI14 185 aa9.53□□□□□ -0.88
CLCN6-205ENST00000376492 PKD1P98161 4303 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 HELTA6NFD8 242 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 DNASE2O00115 360 aaPredicted RBP9.52□□□□□ -0.89
CLCN6-205ENST00000376492 FGF7P21781 194 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 S100A7P31151 101 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 PLP1P60201 277 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 RPL11P62913 178 aaKnown RBP9.52□□□□□ -0.89
CLCN6-205ENST00000376492 NDUFA5Q16718 116 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 HSD17B11Q8NBQ5 300 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 KRTAP4-5Q9BYR2 181 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 MED9Q9NWA0 146 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 PFDN2Q9UHV9 154 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 SLC45A2Q9UMX9 530 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 RNF24Q9Y225 148 aa9.52□□□□□ -0.89
CLCN6-205ENST00000376492 IGHV4-4A0A075B6R2 117 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 C11orf94C9JXX5 98 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 AGPAT2O15120 278 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 RBMY1A1P0DJD3 496 aaKnown RBP9.51□□□□□ -0.89
CLCN6-205ENST00000376492 RBMY1CP0DJD4 496 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 HLA-DMBP28068 263 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
CLCN6-205ENST00000376492 LEMD1Q68G75 181 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 Q6ZTC4 211 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 TMED6Q8WW62 240 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 MGST2Q99735 147 aa9.51□□□□□ -0.89
CLCN6-205ENST00000376492 ELOA3CA0A087WX78 387 aaPredicted RBP9.5□□□□□ -0.89
CLCN6-205ENST00000376492 TRAV1-1A0A0B4J248 108 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 SMCO3A2RU48 225 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 PRSS29PA6NIE9 313 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 TEX46H3BTG2 121 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 K7EQG2 157 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 RTL8CO15255 209 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 M6PRP20645 277 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 ACOT6Q3I5F7 207 aaPredicted RBP9.5□□□□□ -0.89
CLCN6-205ENST00000376492 AKR1C8PQ5T2L2 129 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 C1orf194Q5T5A4 169 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 ALKAL2Q6UX46 152 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 TMEM182Q6ZP80 229 aaPredicted RBP9.5□□□□□ -0.89
CLCN6-205ENST00000376492 Q6ZRG5 221 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 FAM24BQ8N5W8 94 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 DCANP1Q8TF63 244 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 PBDC1Q9BVG4 233 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 HRH4Q9H3N8 390 aa9.5□□□□□ -0.89
CLCN6-205ENST00000376492 GIG44P09565 113 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-205ENST00000376492 DEFB131AP59861 70 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 LYZP61626 148 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 B2MP61769 119 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 TMEM41BQ5BJD5 291 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 CYP2G1PQ6ZSU1 146 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 BPIFCQ8NFQ6 507 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 STXBP6Q8NFX7 210 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 OR1L4Q8NGR5 311 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 PFDN5Q99471 154 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 SLC39A9Q9NUM3 307 aa9.49□□□□□ -0.89
CLCN6-205ENST00000376492 HSPG2P98160 4391 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 M0R2N4 97 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 HBE1P02100 147 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 NMBP08949 121 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 GATA2P23769 480 aaPredicted RBP9.48□□□□□ -0.89
CLCN6-205ENST00000376492 RAB2AP61019 212 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 SIGLEC15Q6ZMC9 328 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 MBD3L1Q8WWY6 194 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 RSG1Q9BU20 258 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 SEPSECSQ9HD40 501 aaKnown RBP9.48□□□□□ -0.89
CLCN6-205ENST00000376492 PXMP4Q9Y6I8 212 aa9.48□□□□□ -0.89
CLCN6-205ENST00000376492 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
CLCN6-205ENST00000376492 NDUFS6O75380 124 aaKnown RBP9.47□□□□□ -0.89
CLCN6-205ENST00000376492 LINC00869P0C866 280 aa9.47□□□□□ -0.89
CLCN6-205ENST00000376492 SCRT1Q9BWW7 348 aa9.47□□□□□ -0.89
CLCN6-205ENST00000376492 MRPL32Q9BYC8 188 aaKnown RBP9.47□□□□□ -0.89
CLCN6-205ENST00000376492 ACTR3CQ9C0K3 210 aaPredicted RBP9.47□□□□□ -0.89
CLCN6-205ENST00000376492 SH3BGRL3Q9H299 93 aa9.47□□□□□ -0.89
CLCN6-205ENST00000376492 NRN1Q9NPD7 142 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms