RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 FAM231CP0DMU5 169 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 CRYGSP22914 178 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 EBI3Q14213 229 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 RSPO1Q2MKA7 263 aaPredicted RBP6.22□□□□□ -1.41
USP48-203ENST00000374732 ZNF791Q3KP31 576 aaPredicted RBP6.22□□□□□ -1.41
USP48-203ENST00000374732 FAM120AOSQ5T036 256 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 CFAP126Q5VTH2 177 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 Q6ZS52 159 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 TMEM75Q8N9X5 138 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 FAM57AQ8TBR7 257 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 PRR13Q9NZ81 148 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 HIGD1BQ9P298 99 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 TEX50A0A1B0GTY4 177 aa6.21□□□□□ -1.41
USP48-203ENST00000374732 J3QL48 77 aa6.21□□□□□ -1.41
USP48-203ENST00000374732 K7EM74 188 aa6.21□□□□□ -1.41
USP48-203ENST00000374732 DRAM1Q8N682 238 aa6.21□□□□□ -1.41
USP48-203ENST00000374732 GNB4Q9HAV0 340 aa6.21□□□□□ -1.41
USP48-203ENST00000374732 RABAC1Q9UI14 185 aa6.21□□□□□ -1.41
USP48-203ENST00000374732 TRAV1-2A0A0B4J238 106 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 BMPR1BO00238 502 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 IGKCP01834 107 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 COX8AP10176 69 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 COX5AP20674 150 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 CYCSP99999 105 aaKnown RBP6.21□□□□□ -1.42
USP48-203ENST00000374732 DEFB110Q30KQ9 67 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 AMN1Q8IY45 258 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 PAXXQ9BUH6 204 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 LINC00527Q9UJ94 153 aa6.21□□□□□ -1.42
USP48-203ENST00000374732 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 TRAV8-4A0A0B4J246 113 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 FAM19A3Q7Z5A8 133 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 PRR25Q96S07 402 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 F5P12259 2224 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 IGKV3D-11A0A0A0MRZ8 115 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 MGST3O14880 152 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 MRPS12O15235 138 aaKnown RBP6.2□□□□□ -1.42
USP48-203ENST00000374732 FAM222AQ5U5X8 452 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 C5orf42Q9H799 3197 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 REV3LO60673 3130 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 TRAV2A0A0B4J234 112 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 K7ERJ3 54 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 ARL16Q0P5N6 197 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 LGALS9BQ3B8N2 356 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 ORMDL2Q53FV1 153 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 EBLN2Q6P2I7 272 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 CEMP1Q6PRD7 247 aaPredicted RBP6.2□□□□□ -1.42
USP48-203ENST00000374732 ZNF721Q8TF20 911 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 LRRC29Q8WV35 223 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 METTL26Q96S19 204 aa6.2□□□□□ -1.42
USP48-203ENST00000374732 THADAQ6YHU6 1953 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 IGHV5-51A0A0C4DH38 117 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.19□□□□□ -1.42
USP48-203ENST00000374732 A0A1W2PQD3 144 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 IGKV3-11P04433 115 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 NPC2P61916 151 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 RPS11P62280 158 aaKnown RBP eCLIP6.19□□□□□ -1.42
USP48-203ENST00000374732 TEPPQ6URK8 271 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 OR5C1Q8NGR4 320 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 MRPL18Q9H0U6 180 aaKnown RBP6.19□□□□□ -1.42
USP48-203ENST00000374732 ZFAND3Q9H8U3 227 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 IGLL5B9A064 214 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 SS18L1O75177 396 aaPredicted RBP6.19□□□□□ -1.42
USP48-203ENST00000374732 DSCR4P56555 118 aaPredicted RBP6.19□□□□□ -1.42
USP48-203ENST00000374732 HERVK_113P61574 105 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 MIC13Q5XKP0 118 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
USP48-203ENST00000374732 ZNF563Q8TA94 476 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 ABRACLQ9P1F3 81 aa6.19□□□□□ -1.42
USP48-203ENST00000374732 IGKV1D-42A0A075B6H8 117 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 FAM181BA6NEQ2 426 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 GYPBP06028 91 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 PTHLHP12272 177 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 ZNF20P17024 532 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 CDK5R1Q15078 307 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 NMES1Q9C002 83 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 TMSB15BA0A087X1C1 80 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 J3QLW9 94 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 IGHG1P01857 330 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 MYCNOSP40205 109 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 RPP25LQ8N5L8 163 aaKnown RBP6.18□□□□□ -1.42
USP48-203ENST00000374732 RFLNBQ8N5W9 214 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 PGLYRP4Q96LB8 373 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 ODF3Q96PU9 254 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 SPANXDQ9BXN6 97 aa6.18□□□□□ -1.42
USP48-203ENST00000374732 IGHV1OR21-1A0A087WYE8 117 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 C6orf223Q8N319 242 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 CLDND2Q8NHS1 167 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 GPHA2Q96T91 129 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 TM2D3Q9BRN9 247 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 DCTN5Q9BTE1 182 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 GNG13Q9P2W3 67 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 V9GY05 133 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 TRAV41A0A0B4J266 112 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 A1L4Q6 167 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 FCGR2CP31995 323 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 ERCC8Q13216 396 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 ABCA11PQ4W5N1 156 aa6.17□□□□□ -1.42
USP48-203ENST00000374732 WDR38Q5JTN6 314 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms