RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 SAP30O75446 220 aa13.22□□□□□ -0.29
PFDN6-201ENST00000374606 IFNA1P01562 189 aa13.22□□□□□ -0.29
PFDN6-201ENST00000374606 CD5P06127 495 aa13.22□□□□□ -0.29
PFDN6-201ENST00000374606 SNRPCP09234 159 aaKnown RBP13.22□□□□□ -0.29
PFDN6-201ENST00000374606 PPT1P50897 306 aa13.22□□□□□ -0.29
PFDN6-201ENST00000374606 CCL20P78556 96 aa13.22□□□□□ -0.29
PFDN6-201ENST00000374606 GUK1Q16774 197 aa13.22□□□□□ -0.29
PFDN6-201ENST00000374606 BLNKQ8WV28 456 aa13.22□□□□□ -0.29
PFDN6-201ENST00000374606 GNG13Q9P2W3 67 aa13.22□□□□□ -0.29
PFDN6-201ENST00000374606 H3BQ15 152 aa13.21□□□□□ -0.29
PFDN6-201ENST00000374606 H3BTX0 84 aa13.21□□□□□ -0.29
PFDN6-201ENST00000374606 NBEAP1P0C6P0 100 aa13.21□□□□□ -0.29
PFDN6-201ENST00000374606 CD33P20138 364 aa13.21□□□□□ -0.29
PFDN6-201ENST00000374606 MEOX2P50222 304 aa13.21□□□□□ -0.29
PFDN6-201ENST00000374606 MANBALQ9NQG1 85 aa13.21□□□□□ -0.29
PFDN6-201ENST00000374606 AURKAIP1Q9NWT8 199 aaPredicted RBP13.21□□□□□ -0.29
PFDN6-201ENST00000374606 ZNF586Q9NXT0 402 aa13.21□□□□□ -0.29
PFDN6-201ENST00000374606 SMAD5-AS1Q9Y6J3 95 aa13.21□□□□□ -0.29
PFDN6-201ENST00000374606 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
PFDN6-201ENST00000374606 OXLD1Q5BKU9 147 aa13.2□□□□□ -0.3
PFDN6-201ENST00000374606 FAM90A2PQ658T7 463 aa13.2□□□□□ -0.3
PFDN6-201ENST00000374606 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.2□□□□□ -0.3
PFDN6-201ENST00000374606 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
PFDN6-201ENST00000374606 IGKV3-7A0A075B6H7 116 aa13.19□□□□□ -0.3
PFDN6-201ENST00000374606 UBE2G2P60604 165 aa13.19□□□□□ -0.3
PFDN6-201ENST00000374606 PDE6HQ13956 83 aa13.19□□□□□ -0.3
PFDN6-201ENST00000374606 DEFB114Q30KQ6 69 aa13.19□□□□□ -0.3
PFDN6-201ENST00000374606 RBPMS2Q6ZRY4 209 aaKnown RBP13.19□□□□□ -0.3
PFDN6-201ENST00000374606 MCRIP2Q9BUT9 160 aaKnown RBP13.19□□□□□ -0.3
PFDN6-201ENST00000374606 NRN1Q9NPD7 142 aa13.19□□□□□ -0.3
PFDN6-201ENST00000374606 ARL2-SNX15V9GYD0 113 aa13.19□□□□□ -0.3
PFDN6-201ENST00000374606 ZNF253O75346 499 aa13.18□□□□□ -0.3
PFDN6-201ENST00000374606 BCL2P10415 239 aa13.18□□□□□ -0.3
PFDN6-201ENST00000374606 HAGHQ16775 308 aa13.18□□□□□ -0.3
PFDN6-201ENST00000374606 TMEM61Q8N0U2 210 aa13.18□□□□□ -0.3
PFDN6-201ENST00000374606 C17orf77Q96MU5 243 aa13.18□□□□□ -0.3
PFDN6-201ENST00000374606 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
PFDN6-201ENST00000374606 A0A1W2PRE2 83 aa13.17□□□□□ -0.3
PFDN6-201ENST00000374606 SLC17A3O00476 420 aa13.17□□□□□ -0.3
PFDN6-201ENST00000374606 PAGE4O60829 102 aa13.17□□□□□ -0.3
PFDN6-201ENST00000374606 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
PFDN6-201ENST00000374606 PMS2P11Q13670 270 aa13.17□□□□□ -0.3
PFDN6-201ENST00000374606 CD300EQ496F6 205 aaPredicted RBP13.17□□□□□ -0.3
PFDN6-201ENST00000374606 TOR2AQ5JU69 321 aa13.17□□□□□ -0.3
PFDN6-201ENST00000374606 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
PFDN6-201ENST00000374606 SAMD13Q5VXD3 122 aa13.17□□□□□ -0.3
PFDN6-201ENST00000374606 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 LOC102723971A0A1B0GUV8 181 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 FAM74A7A6NL05 159 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 NDUFB4O95168 129 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 IGLV1-51P01701 117 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 TAGLN2P37802 199 aaKnown RBP13.16□□□□□ -0.3
PFDN6-201ENST00000374606 INSL3P51460 131 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 RANP62826 216 aaKnown RBP13.16□□□□□ -0.3
PFDN6-201ENST00000374606 PSG9Q00887 426 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 CST9LP1Q5W188 147 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 FAM210AQ96ND0 272 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 Q9H3A6 140 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 AAMDCQ9H7C9 122 aa13.16□□□□□ -0.3
PFDN6-201ENST00000374606 YTHDF2Q9Y5A9 579 aaKnown RBP13.16□□□□□ -0.3
PFDN6-201ENST00000374606 RBFOX3A6NFN3 312 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
PFDN6-201ENST00000374606 TSPAN4O14817 238 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 TFPI2P48307 235 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 LYPD1Q8N2G4 141 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 WFDC9Q8NEX5 89 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 C16orf92Q96LL3 132 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 SPAG8Q99932 426 aaPredicted RBP13.15□□□□□ -0.3
PFDN6-201ENST00000374606 EIF5A2Q9GZV4 153 aaKnown RBP13.15□□□□□ -0.3
PFDN6-201ENST00000374606 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.3
PFDN6-201ENST00000374606 OTORQ9NRC9 128 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 MED9Q9NWA0 146 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 VAX2Q9UIW0 290 aa13.15□□□□□ -0.3
PFDN6-201ENST00000374606 TENM3Q9P273 2699 aa13.15□□□□□ -0.31
PFDN6-201ENST00000374606 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 LINC00862A6NCI5 91 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 C11orf94C9JXX5 98 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 SOCS3O14543 225 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 ATP5G3P48201 142 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 MEF2BQ02080 365 aaPredicted RBP13.14□□□□□ -0.31
PFDN6-201ENST00000374606 ZNF506Q5JVG8 444 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 LCN12Q6JVE5 192 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 COMMD7Q86VX2 200 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 DCANP1Q8TF63 244 aa13.14□□□□□ -0.31
PFDN6-201ENST00000374606 NKX6-2Q9C056 277 aaPredicted RBP13.14□□□□□ -0.31
PFDN6-201ENST00000374606 ISLRO14498 428 aa13.13□□□□□ -0.31
PFDN6-201ENST00000374606 ICAM4Q14773 271 aa13.13□□□□□ -0.31
PFDN6-201ENST00000374606 GUCA2BQ16661 112 aa13.13□□□□□ -0.31
PFDN6-201ENST00000374606 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
PFDN6-201ENST00000374606 RXFP4Q8TDU9 374 aa13.13□□□□□ -0.31
PFDN6-201ENST00000374606 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
PFDN6-201ENST00000374606 GPR61Q9BZJ8 451 aa13.13□□□□□ -0.31
PFDN6-201ENST00000374606 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
PFDN6-201ENST00000374606 RAB19A4D1S5 217 aa13.12□□□□□ -0.31
PFDN6-201ENST00000374606 PGPA6NDG6 321 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms