RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SLC25A16P16260 332 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 FOXC1Q12948 553 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 Q6P435 159 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 C8orf46Q8TAG6 207 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 SIT1Q9Y3P8 196 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 ROS1P08922 2347 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 PRR20EP86478 221 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 PRR20CP86479 221 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 PRR20DP86480 221 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 PRR20BP86481 221 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 PRR20AP86496 221 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 MRPL51Q4U2R6 128 aaKnown RBP8.31□□□□□ -1.08
CD28-202ENST00000374481 CCL17Q92583 94 aa8.31□□□□□ -1.08
CD28-202ENST00000374481 NLRC5Q86WI3 1866 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 C1orf53Q5VUE5 145 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 GUSBP11Q6P575 273 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 C6orf15Q6UXA7 325 aaPredicted RBP8.3□□□□□ -1.08
CD28-202ENST00000374481 Q6ZS52 159 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 ANKRD29Q8N6D5 301 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 E9PLD3 99 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 ASCL2Q99929 193 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 DOCK7Q96N67 2140 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 PMS2P5A8MQ11 134 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 IGLV3-1P01715 115 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 ID1P41134 155 aa8.3□□□□□ -1.08
CD28-202ENST00000374481 NXPH1P58417 271 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 RSPO1Q2MKA7 263 aaPredicted RBP8.29□□□□□ -1.08
CD28-202ENST00000374481 COPS9Q8WXC6 57 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 PRADC1Q9BSG0 188 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 RAB1BQ9H0U4 201 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 FRMPD3Q5JV73 1810 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 SPTBN1Q01082 2364 aaKnown RBP8.29□□□□□ -1.08
CD28-202ENST00000374481 IGLV3-32A0A0A0MS00 114 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 IL11RAQ14626 422 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 Q6ZR03 302 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 KLK10O43240 276 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 C2orf91Q6ZV80 131 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 FER1L5A0AVI2 2057 aa8.29□□□□□ -1.08
CD28-202ENST00000374481 SH2D1AO60880 128 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 HLA-DMBP28068 263 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 C3orf36Q3SXR2 165 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 SMRP1Q8NCR6 262 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 MRPL20Q9BYC9 149 aaKnown RBP8.28□□□□□ -1.08
CD28-202ENST00000374481 DOCK10Q96BY6 2186 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 C10orf55Q5SWW7 151 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 ITLN1Q8WWA0 313 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 ZGRF1Q86YA3 2104 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 FAM236AA0A1B0GUQ0 79 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 FAM236BA0A1B0GV22 79 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 M0QXV9 152 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 RNASE2P10153 161 aaKnown RBP8.28□□□□□ -1.08
CD28-202ENST00000374481 FAM110AQ9BQ89 295 aa8.28□□□□□ -1.08
CD28-202ENST00000374481 F8VRH5 84 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 CXCL12P48061 93 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 XGP55808 180 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 HIST1H4AP62805 103 aaKnown RBP8.27□□□□□ -1.09
CD28-202ENST00000374481 TMEM30BQ3MIR4 351 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 FOXL2NBQ6ZUU3 175 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 IGF2BP2-AS1Q96M15 143 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 IGKV3-7A0A075B6H7 116 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 IGHV3-35A0A0C4DH35 117 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 FAM106CPP0CH98 169 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 INSL3P51460 131 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 FAM106AQ4KMX7 169 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 RNF182Q8N6D2 247 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 FAM57AQ8TBR7 257 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 SHISA9B4DS77 424 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 FAM120AOSQ5T036 256 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 FAM74A4Q5TZK3 123 aa8.27□□□□□ -1.09
CD28-202ENST00000374481 ZNF295-AS1Q8N0V1 137 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 PRSS46E5RG02 174 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 GDF5OSQ5U4N7 250 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 C16orf92Q96LL3 132 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 RNF125Q96EQ8 232 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 S4R3C0 116 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 IGKV2-40A0A087WW87 121 aaPredicted RBP8.26□□□□□ -1.09
CD28-202ENST00000374481 IGKV2D-40P01614 121 aaPredicted RBP8.26□□□□□ -1.09
CD28-202ENST00000374481 MORN5Q5VZ52 161 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 Q8N8P6 123 aa8.26□□□□□ -1.09
CD28-202ENST00000374481 RFPL3SP0C7P2 107 aa8.25□□□□□ -1.09
CD28-202ENST00000374481 TET1Q8NFU7 2136 aa8.25□□□□□ -1.09
CD28-202ENST00000374481 KIAA1549Q9HCM3 1950 aa8.25□□□□□ -1.09
CD28-202ENST00000374481 A0A1W2PPI3 338 aa8.25□□□□□ -1.09
CD28-202ENST00000374481 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
CD28-202ENST00000374481 LGALS1P09382 135 aaKnown RBP8.25□□□□□ -1.09
CD28-202ENST00000374481 TRGV9Q99603 122 aa8.25□□□□□ -1.09
CD28-202ENST00000374481 A0A1W2PR77 199 aa8.25□□□□□ -1.09
CD28-202ENST00000374481 TMEM190Q8WZ59 177 aa8.25□□□□□ -1.09
CD28-202ENST00000374481 VWA8A3KMH1 1905 aa8.25□□□□□ -1.09
CD28-202ENST00000374481 IGHV1-45A0A0A0MS14 117 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 DUX4L9Q6RFH8 374 aaPredicted RBP8.24□□□□□ -1.09
CD28-202ENST00000374481 Q8TAT8 98 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 FXYD5Q96DB9 178 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 TMEM14BQ9NUH8 114 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 A0A087WX48 190 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 IQCF6A8MYZ5 107 aa8.24□□□□□ -1.09
CD28-202ENST00000374481 CDX4O14627 284 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms